Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01158 ATGATGGCTGGAAGTAATCAAATTAACCTCAACGACTCTAAGATGGTGGTTCCACTTAATACCTGGGTTCTTATTTCCAACTTTAAGTTGGCTTACAATCTTCTTCGTCGCCCTGATGGCACGTTCAATCGCCATTTGGCCGAGTTTCTTGACCGAAAAGTCCCAGCCAATGCTAACCCTGTTGATGGGACTTTCTCATTTGATGTCGTTATCGATCGAGCTACTGGTCTCCTTTGTCGAATATATCGACCCGCCATTGGAGATGAATCTCAGAGTACTTACATTGTTGATCTTGAGAAGCCTGTGGATTCTGAGGTTGTTGCCCCTGTTATTATTTTCTTTCATGGTGGAAGCTTTGCTCATTCCTCTGCTAACAGTGCTATCTATGATACGCTATGCCGTCGATTAGTCAGCATTTGCAAGGCTGTTGTCGTCTCTGTGAACTACAGGCGTGCACCTGAGAATCGTTATCCTTGTGCTTATGATGATGGATGGACTGCGCTCAATTGGGTGAAGTCAAAATCATGGCTTCGAAGTAAAGACTCGAAGACCTATATTTATTTGGCTGGCGATAGTTCAGGTGGAAACATCGTACACCATGTTGCATCGAGAGCAGTAAAGTCGGGGATCGAAGTATTCGGTAATATACTTCTCAATCCTATGTTTGGAGGGCAGGAAAGAACTAAATCTGAGGTTCGGTTGGATGGAAAGTATTTCGTTACCATTCGGGATAGAGACTGGTATTGGAGGGCCTTCCTTCCTGAAGGGGAAGATAGGGATCATCCAGCATGTAATCCCTTCGGCCCGAGAGGTAATAGTCTCGAAAAAATCAAGTTCCCAAAGAGCCTTGTCGTGGTGGCTGGTTTCGATCTCGTCAAAGACTGGCAATTAGCTTATGCTAAAGGGCTCGAGAAGGATGGCCAGAAGGTGAAACTTTTGTATCTTGATCAAGCAACAGTTGGCTTCTACTTGCTACCGAATACCGAGCACTTCTATACCGTCATGGACGAGATAAGTGAATTCGTGAGTTCTGACTGTTAA 1041 44.76 MMAGSNQINLNDSKMVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGTFSFDVVIDRATGLLCRIYRPAIGDESQSTYIVDLEKPVDSEVVAPVIIFFHGGSFAHSSANSAIYDTLCRRLVSICKAVVVSVNYRRAPENRYPCAYDDGWTALNWVKSKSWLRSKDSKTYIYLAGDSSGGNIVHHVASRAVKSGIEVFGNILLNPMFGGQERTKSEVRLDGKYFVTIRDRDWYWRAFLPEGEDRDHPACNPFGPRGNSLEKIKFPKSLVVVAGFDLVKDWQLAYAKGLEKDGQKVKLLYLDQATVGFYLLPNTEHFYTVMDEISEFVSSDC 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10667875 10670485 + Carg21138-RA Car01g01158 142022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01158 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 111 127 IPR002168 GO:0016787
Car01g01158 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 186 198 IPR033140 -
Car01g01158 346 Pfam alpha/beta hydrolase fold 111 323 IPR013094 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01158 Car-Chr1:10667875 Car10g00960 Car-Chr10:8732848 0 dispersed
Car07g00806 Car-Chr7:4274253 Car01g01158 Car-Chr1:10667875 3.96E-48 dispersed
Car14g00637 Car-Chr14:3548585 Car01g01158 Car-Chr1:10667875 3.11E-34 dispersed
Car01g01158 Car-Chr1:10667875 Car17g01078 Car-Chr17:8370949 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01158 K14493 - csv:101213253 639.802