Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01165 ATGCTCCACACAGATAGCAAGCACAGGGAACGTGCTTTCAGAATGGAGGTGGATCTGCTGAGCCGCTTGCACTCTCCTTGTTTGGTGGAGTTGCTTGGCTACTGCGCTGACCAACACCATAGGCTACTGATATTTGAATTTATGCACAATGGTACTCTTCATCATCATCTACATAATCCCAACACTGAATCTAAGCCATTGGATTGGAATACTAGATTAAGGATAGCCCTTGATTGTGCCAAGGCACTTGAGTTTCTCCATGAGCATGCAGTTCCGTCTGTTATCCATAGAAACTTCAAGTGCACCAATGTTCTGCTAGATCAGGATTTTCGAGCCAAGGTGTCCGATTTCAGTTCGGCCAAGATGGGCTCTGATAAGATCAATGGTCAAATATCTACACAAGTACTCGGAACAACAGGATATCTTGCACCAGAGTATGCTTCAACAGGTAAACTCACAACAAAGTCAGATGTGTATAGCTATGGTGTCGTGCTGCTAGAGCTTTTGACGGGTCGAGTGCCAGTTGATATCAAGCGGCCACAGGGCGAGCACGTTCTTGTCTCATGGGCTCTCCCAAGGCTAACCAATAGAGAAAAAGTAGAGAAAATGATCGACCCAGCCATTCAAGGAAAATACTCAAAGAAGGATCTAATTCAGGTTGCAGCCATTGCAGCAATGTGCGTGCAGCCCGAAGCCGACTACCGACCTCTGATGACCGACGTCGTGCAGTCACTGGTTCCTCTCGTAAAGAACCCATCTTCCTCATCTAGATTCTTCAAATGA 783 46.36 MLHTDSKHRERAFRMEVDLLSRLHSPCLVELLGYCADQHHRLLIFEFMHNGTLHHHLHNPNTESKPLDWNTRLRIALDCAKALEFLHEHAVPSVIHRNFKCTNVLLDQDFRAKVSDFSSAKMGSDKINGQISTQVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPQGEHVLVSWALPRLTNREKVEKMIDPAIQGKYSKKDLIQVAAIAAMCVQPEADYRPLMTDVVQSLVPLVKNPSSSSRFFK 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10799747 10802155 - Carg21145-RA Car01g01165 142029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01165 260 Pfam Protein tyrosine and serine/threonine kinase 5 245 IPR001245 GO:0004672|GO:0006468
Car01g01165 260 ProSiteProfiles Protein kinase domain profile. 1 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01165 Car-Chr1:10799747 Car10g00931 Car-Chr10:7245935 4.22E-155 dispersed
Car01g01165 Car-Chr1:10799747 Car11g01583 Car-Chr11:12563543 1.22E-122 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88604 PF07714 PK_Tyr_Ser-Thr 1.10E-37 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01165 - - csv:101210578 506.908