Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01188 ATGGCCAATCCTATCACTCTCCAAGAGATTCGCAACGAGTCCGTCGATCTGGAACATATTCCAATCGGCGAAGTGTTTGAGAAGCTAAAATGCACAAAAGAAGGTCTCAGTTCAGAGGAAGGAGCCAATCGGCTTCAAGTTTTCGGACCGAACAAACTGGAAGAGAAAAAGGAGAGCAAAATCCTGAAATTTCTAGGGTTTATGTGGAACCCTCTCTCTTGGGTCATGGAAGCAGCGGCTATAATGGCTATTGTCTTAGCAAACGGCGGCGGAAGGCCTCCGGACTGGCAGGATTGCGTGGGAGTCATTGCCCTACTTTTAATCAACTCAACCATCAGCTTTCTTGAAGAAAACAACGCAGGAAATGCAGCTGCAGCCCTTATGGCCGGTCTTGCTCCCAGAACTAAGGTTCTCAGAGATGGTCGTTGGAGTGAGCAAGATGCTGCAATGCTTGTTCCAGGAGATATAATAAGTATCAAACTGGGAGACATTGTCCCTGCTGATGCTCGTCTTCTTGAAGGGGACCCTTTGAAGATTGATCAATCTGCTTTAACTGGCGAGTCCCTCCCGGTTACCAAAAACCCTTCGGACGAGGTTTTTTCGGGGTCGACGTGTAAACAGGGAGAAATCGAAGCAGTAGTGATTGCCACTGGTGTGCATACCTTCTTTGGAAAAGCTGCTCATTTAGTGGACAGCACCAATCAAGTTGGGCATTTCCAAAAAGTTCTTACTGCCATTGGGAACTTCTGTATTTGCTCCATTGCTATTGGAATTGTTATTGAGATCATAGTCATGTACCCAATTCAACATCGTGCATATAGGGATGGCATTGACAATTTGCTGGTTCTTTTGATTGGAGGAATTCCTATTGCCATGCCCACTGTTTTGTCTGTCACCATGGCCATTGGTTCCCACCGTCTTTCTAAGCAAGGTGCAATTACCAAGCGGATGACTGCCATTGAGGAGATGGCTGGCATGGATGTCCTTTGCAGTGATAAGACTGGAACATTAACCTTGAATAGGCTCACTGTTGACCAATCCTTGACCGAAGTCTTTGTGGGGGATGTGGATAAAGAACATGTCATTCTTCTTGCAGCAAGGGCCTCTAGGACCGAAAATCAGGACGCCATAGATGCTGCTATCGTTGGAATGCTGGCAGATCCAAAAGAGGCACGAGCTGGTATTAGAGAGGTTCATTTTTTTCCATTCAACCCTGTTGATAAGAGAACTGCTCTCACTTATATTGATTCCAACGATAGCTGGCACCGAGTTAGCAAAGGTGCTCCAGAGCAGATCTTAAATCTTTGCAACTCAAATGAAGCCGTCAGGGAGAAAGTTCATGGAGTGATTGATAAGTTTGCTGAATGCGGACTCCGATCATTGGGTGTTGCCAGACAGGAAGTACCTGAGAAAACCAAAGAAAGTCCAGGAGATCCATGGCAACTTGTTGGGTTGTTAGCTCTGTTTGATCCTCCCAGGCATGATAGTGCAGAAACCATCAGAAGGGCTCTGAACCTTGGAGTGAATGTCAAGATGATTACTGGGGACCAACTGGCTATTGCTAAGGAAACCGGTCGGAGGCTTGGTATGGGATCAAATATGTACCCTTCTTCTGCATTACTTAGTCAAGACAGGGATGCATCAGCAGACACCCTTCCTGTGGATGAGTTGATTGAAACGGCTGATGGATTTGCTGGTGTATTTCCAGAACACAAATATGAAATTGTGAGAAGGTTACAAGAGAAGAAGCACATTTGTGGAATGACTGGAGATGGTGTCAATGACGCCCCTGCACTAAAGAAGGCAGATATTGGCATTGCTGTTGCTGATGCAACTGATGCAGCTAGGAGCGCTTCTGACATCGTCCTCACCGAACCAGGATTGAGCGTCATTATCAGTGCAGTACTGACCAGTAGAGCTATTTTCCAGAGGATGAAGAATTATACGATTTATGCAGTTTCCATCACCATCCGTATAGTGTTTGGTTTTCTGTTGATTGCTTTGATTTGGAAATTTGATTTCGCTCCATTCATGGTTCTAATTATAGCTATTCTAAACGATGGAACAATCATGACCATTTCGAAGGATCGAGTTAAGCCTTCTCCACAGCCCGACAGTTGGAAGTTGAAGGAAATTTTTGCTACTGGCATTGTGTTGGGAGGATACTTGGCTCTGATGACAGTGTTATTCTTCTGGATCGTGCGAGACACCGACTTTTGCTCGAACAAGTTTTACGTAGCATCCCTGAGGAACGACAACCCGAGAATGATGGCAGCATTGTATCTACAAGTTAGTATCGTGAGTCAGGCCCTTATCTTCGTCACAAGGTCTCGAAGTTGGTCCTTCGTGGAACGTCCCGGACTTCTCTTAGTGAGCGCTTTCATAGTTGCCCAGCTGGTAGCAACACTAATAGCAGTGTATGCAAGCTGGGATTTTGCAAGAATAAAAGGCACCGGGTGGGGATGGGCTGGTGTGATCTGGCTTTATAGTTTGATAACTTACATCCCTCTTGATATCCTCAAATTTACCATTCGCTATATTCTTAGTGGAAGGGCTTGGAACAACCTTTTGCAGAACAAGACTGCTTTCACAACCAAGAAAGATTACGGGAAAGAAGAGAGAGAAGCACAATGGGCAACCACACAAAGAACCATTCATGGTCTTCAACTACCTCAATCCAACAACGCTCTCTCTGATAGGAACAGTTGTGGGGAGCTCTCCGAAATTGCCGAGCAAGCTAGACGACGCGCTGAAATCGCAAGGTTGCGGGAGTTGCACACTCTAAAAGGTCGGGTGGAGTCGGTGGTGAAGTTGAAAGGACTGGACATCGACACAATTAATCAACATTACACTGTCTAA 2859 45.72 MANPITLQEIRNESVDLEHIPIGEVFEKLKCTKEGLSSEEGANRLQVFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWQDCVGVIALLLINSTISFLEENNAGNAAAALMAGLAPRTKVLRDGRWSEQDAAMLVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGIVIEIIVMYPIQHRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSKQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDQSLTEVFVGDVDKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSNDSWHRVSKGAPEQILNLCNSNEAVREKVHGVIDKFAECGLRSLGVARQEVPEKTKESPGDPWQLVGLLALFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSALLSQDRDASADTLPVDELIETADGFAGVFPEHKYEIVRRLQEKKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFLLIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGIVLGGYLALMTVLFFWIVRDTDFCSNKFYVASLRNDNPRMMAALYLQVSIVSQALIFVTRSRSWSFVERPGLLLVSAFIVAQLVATLIAVYASWDFARIKGTGWGWAGVIWLYSLITYIPLDILKFTIRYILSGRAWNNLLQNKTAFTTKKDYGKEEREAQWATTQRTIHGLQLPQSNNALSDRNSCGELSEIAEQARRRAEIARLRELHTLKGRVESVVKLKGLDIDTINQHYTV 952
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11027067 11032498 + Carg21169-RA Car01g01188 142052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01188 952 Pfam Cation transporter/ATPase, N-terminus 19 82 IPR004014 -
Car01g01188 952 Pfam E1-E2 ATPase 132 310 - -
Car01g01188 952 Pfam haloacid dehalogenase-like hydrolase 326 603 - -
Car01g01188 952 ProSitePatterns E1-E2 ATPases phosphorylation site. 332 338 IPR018303 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01188 Car12g00275 CCT
Car01g01188 Car05g00639 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01188 Car-Chr1:11027067 Car05g00639 Car-Chr5:3866859 0 dispersed
Car01g01188 Car-Chr1:11027067 Car12g00275 Car-Chr12:1821076 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01188 K01535 - csv:101219224 1648.64