Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01189 ATGCAAATTCAAGACTTTCATTTTCTCCCCTTTTTTCTTCTTCTTCTTCTCTCAACTGGCTGTTTTGCTAAGCTTCACCATAACTATTACCATAATTCATGCCCAAATGTTGAGTCCATTGTGAGAGCTGCAGTGAAGCAGAAGTTTGAACAGACGTTTGTTACTGCTCCCGCTACTCTCCGCCTCTTTTTTCACGATTGTTTTGTTCGGGGTTGTGATGCTTCTGTGCTGCTTCATTCGAATAACCACACTTCTGAGAAAGACAATGCTGAGAATCTTTCGCTCGCCGGAGACGGGTTCGATACTGTAATTAAAGCTAAGGCTGCTGTCGATAGCGTGCCGGAATGTAAGAACAAGGTGTCTTGTGCTGACATATTGGCTCTTGCTACTAGAGATGTTGTAGCTTTGACAGGAGGGCCGTCGTATGCGGTGGAGTTGGGAAGGCGAGACGGGCGGATCTCGACACGAAAGAGCGTTCGACACCATCTTCCATTACCTGATTTTGGATTGGATCAGCTGAATGCCATGTTTGCAAGACATGGTCTATCTCAAACAGACATGATTGCTCTCTCAGGTGCACATACAATTGGGTTCTCACACTGCAAGCACTTCTCCAAAAGGCTATATAGCTTCCACAGCAAAAACCGAATCGACCCGACATTCAATCCGAGCTACGTCGACGAGCTCAAGAGGGAATGCCCGAGGAACGTGGACCAGAGAATTGCTGTGGACATGGACTCGAGGTCGTCGTTCACGTTCGACAACGTGTACTTCAAGAATTTGCAGATGGGAAAAGGGCTGTTCACCTCAGACCAAGTGTTGTTCACAGATAGAAGATCAAGGGAAACAGTGAACTTATTTGCTTCCAACAATTCAGCCTTTGAAGAGGCTTTTGTGGTTGCAATGAAAAAGCTTGGGAGAGTGGGAGTCAAAACAAGAAACCAAGGGGAGATCAGAATTGACTGTTCTTCACTCAACTAA 981 45.87 MQIQDFHFLPFFLLLLLSTGCFAKLHHNYYHNSCPNVESIVRAAVKQKFEQTFVTAPATLRLFFHDCFVRGCDASVLLHSNNHTSEKDNAENLSLAGDGFDTVIKAKAAVDSVPECKNKVSCADILALATRDVVALTGGPSYAVELGRRDGRISTRKSVRHHLPLPDFGLDQLNAMFARHGLSQTDMIALSGAHTIGFSHCKHFSKRLYSFHSKNRIDPTFNPSYVDELKRECPRNVDQRIAVDMDSRSSFTFDNVYFKNLQMGKGLFTSDQVLFTDRRSRETVNLFASNNSAFEEAFVVAMKKLGRVGVKTRNQGEIRIDCSSLN 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11033097 11034379 - Carg21170-RA Car01g01189 142053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01189 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Car01g01189 326 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Car01g01189 326 ProSiteProfiles Plant heme peroxidase family profile. 24 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g01189 326 Pfam Peroxidase 41 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01189 Car-Chr1:11033097 Car20g00854 Car-Chr20:6624753 5.52E-149 dispersed
Car01g01189 Car-Chr1:11033097 Car03g00841 Car-Chr3:6803952 1.26E-148 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01189 K00430 - csv:101218982 583.948