Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01198 ATGGAATTGAAGAAAGGGAAATTCGTGAGGTTTTACTCCAATGAGAAGAAGAATCTTGAGCTTCCATGGGAGAAAAACGATGGTAAGAGGCGTTTTGAGTTCGCATTACCATTTTTCAAAATGGGGACTGCTCCATTAACGAATGCGGTTGGGGATAAAGGTAAAATAAGTTCAGATTTAGGGAGATTCAAGATTTTTGTGGAGAATAATGAGGCACAACAGAAGTGGATTCTTAACCCTGAAAGTGAAACGATTCTGAGATGGAATAGGGTTTTTCTGTTCTCTTGTTTGACAGCTCTTTTCGTTGATCCTCTTTTCTTCTACCTTCCTTCTGTGATTCACCATAATAGATCGTCTTGTATGACTACTGATTTCAATTTGGGAATTGCTGTGACTGTTTTTCGCACTTTTGCCGATGTGTTCTATCTTTTTCATATGGTTTTGAAGTTCCGGATGGCTTATGTTTCACCTACTTCGAGAGTTTTTGGGAAAGGTGAACTTGTTACTGATCCAAAGAAGATTGCTAAACGTTACTTGACGTCTGATTTCTGTATAGATCTGATTGCTTCTCTGCCTCTTCCTCAGATTATGATATGGTTTATAATGCCAGCAATTAGAAGCTCTCATGCAGACCATACAAACAATACTCTCGTGTTAATAGTTCTGCTTCAGTACATTCCAAGGTTCTACCTGATCTTCCCGTTGAGTTCCCACATTATCAAAACTACTGGTGTTGTCACAAAGACTGCTTGGGCAGGAGCTGCTTATAACCTTGTATTGTATATGCTAGCTAGTCATATCTTAGGAGCAGCATGGTACTTGTTGTCTGTGGAGCGCCATGCCATGTGCTGGAAGTTCACCTGCAGAAGGGAATTCAGTCCTATGAAATGCCATCTCGACTATCTCGATTGCGGTACTCTAAATGATGTCGACCGTAGGATATGGGAAGTAAATACAACAGTGTTTACCCAATGTTCTCCCGATGAAGATGTCGTTTTCAATTACGGGATATTTGCCAATGCAATCTCGAAAAACGTCATCTCGTTTGGGTTCGCTCAAAAGTACTTCTACTGTCTTTGGTGGGGCTTACAGAACTTGAGTTCCTATGGTCAGGGTTTGGAGACAAGCACCTTCATAGGGGAGACTTCGTTTGCTATCCTCATTGCTATAATGGGTTTGGTCTTGTTTGCTCATTTGATTGGTAATATGCAGACTTATTTGCAATCCATCACTGTGAGACTGGAGGAGTGGCGGGTGAAGCGGCGAGACACGGAGGAGTGGATGAATCATCGGCAGCTCCCCGAAGATTTACAAGAACGTGTGCGGAGATTTGTTCAGTATAAGTGGCTTGCAACGCGAGGAGTTGACGAAGAATCCATCTTACAAGCCCTTCCAACCGATCTTCGTCGAGATATTCAGCGTCACTTGTGCCTCGACCTTGTTCGACGTGTTCCTTTCTTTGCACAAATGGATGATCAGCTTCTCGACGCGATCTGTGAGCGATTAGCGTCGTCTTTATGTACGCAAGGCACGTTCATTGTTCGTGAAGGAGATCCTGTTACCGAGATGTTCTTCATCATCCGAGGAATGCTCGAGAGTTCCACGACAGATGGAGGAAGATCAGGTTTCTTCAATTCAATAACATTGAGACCTGGAGATTTTTGTGGAGAAGAGCTTCTCGCTTGGGCATTGCTACCAAAATCATCAATCAGCTTGCCATCTTCTACTAGAACAGTTAGAGCAATCACTGAAGTAGAAGCCTTTGCTCTACGAGCCGAGGATCTCAAATTCGTAGCGAACCAGTTTCGACGTCTCCATAGCAAGAAGCTTCAACACACGTTTCGGTTTTACTCTTACCACTGGAGAACATGGGCTGCTTGCTTCATTCAAGCAGCATGGCGTCGGTTCAAGAGGAGAATCATAGCAAAGACGCTCAGTATTCAGGAGTCTTTTTCGTTGAATCCCAAAAAGCCAATGGCCGATGAAGACGAGCTAGAAGAGGAAGAACATAATCCACGATCTAATTATTCTCAAGCAAAACAAAACCTCGGCGTCACGATATTGGCGTCGAGGTTTGCTGCAAACACACGAAGAGGAGCACAAAAGCTTAAGGATGTTAACTTAATGAAGCTGCGAAAGCCTGACGAGCCAGACTTTTCTGAAGAACCAGATGATTAA 2178 43.34 MELKKGKFVRFYSNEKKNLELPWEKNDGKRRFEFALPFFKMGTAPLTNAVGDKGKISSDLGRFKIFVENNEAQQKWILNPESETILRWNRVFLFSCLTALFVDPLFFYLPSVIHHNRSSCMTTDFNLGIAVTVFRTFADVFYLFHMVLKFRMAYVSPTSRVFGKGELVTDPKKIAKRYLTSDFCIDLIASLPLPQIMIWFIMPAIRSSHADHTNNTLVLIVLLQYIPRFYLIFPLSSHIIKTTGVVTKTAWAGAAYNLVLYMLASHILGAAWYLLSVERHAMCWKFTCRREFSPMKCHLDYLDCGTLNDVDRRIWEVNTTVFTQCSPDEDVVFNYGIFANAISKNVISFGFAQKYFYCLWWGLQNLSSYGQGLETSTFIGETSFAILIAIMGLVLFAHLIGNMQTYLQSITVRLEEWRVKRRDTEEWMNHRQLPEDLQERVRRFVQYKWLATRGVDEESILQALPTDLRRDIQRHLCLDLVRRVPFFAQMDDQLLDAICERLASSLCTQGTFIVREGDPVTEMFFIIRGMLESSTTDGGRSGFFNSITLRPGDFCGEELLAWALLPKSSISLPSSTRTVRAITEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTWAACFIQAAWRRFKRRIIAKTLSIQESFSLNPKKPMADEDELEEEEHNPRSNYSQAKQNLGVTILASRFAANTRRGAQKLKDVNLMKLRKPDEPDFSEEPDD 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11081202 11085248 + Carg21179-RA Car01g01198 142062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01198 725 ProSiteProfiles cAMP/cGMP binding motif profile. 486 616 IPR000595 -
Car01g01198 725 MobiDBLite consensus disorder prediction 654 679 - -
Car01g01198 725 Pfam Ion transport protein 88 413 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car01g01198 725 MobiDBLite consensus disorder prediction 656 674 - -
Car01g01198 725 Pfam Cyclic nucleotide-binding domain 509 597 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01198 Car-Chr1:11081202 Car02g00892 Car-Chr2:6324982 0 dispersed
Car03g00524 Car-Chr3:5255998 Car01g01198 Car-Chr1:11081202 1.25E-126 dispersed
Car01g01198 Car-Chr1:11081202 Car14g00583 Car-Chr14:3167288 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01198 K05391 - csv:101211072 1230.31