Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01200 ATGGCACCGAGATTGGGGTTTTTGTGTTGGTGGGGAACGGAGAAGGACTCTCAAAAGGGAACTCCGGTGGTTGTGACGATGGAGAAACCCAACTTCTCCGTCGTGGAGATCGACGGTCCTGACGCCGCATTCCGGCCGGTGGAAAAAAGTAGAGGCAAAAATGCTAAACAAGTCACATGGGTTCTTCTTTTAAAGGCCAATCGAGCTGTCGGTTGCATTACTTGGCTTGTTACAGTCCTCTGGGCCTTATTGGGAACAATCAAGAAGAGGCTGATCTACAGGCAAGGAGTCGCCATTGAAGGCGGGAAGTTGGGAAGAGGGAGGTTACTGTTTGGAGTAATTAGAGCTTTCTTAGTGACTTCCATGGCGATTCTTGCTTTTGAAATGCTTGCTTATTTCAGAGGCTGGCATTATTTTCAGAATCCTAATCTCCACATTCCTCAGGCTTCTGATTTGCAAGGATTGCTTCATTCACTCTATGTTGCTTGGTTAACTTTTAGAGCAGACTACATTGCTCCTCTCATTCAAACACTCTCTAAATTTTGCATTGTTTTGTTCCTTATCCAATCAGTGGATCGCATGATCCTTTGTTTTGGTTGCTTGTGGATAAAGTGCAAAAGAATTGAACCCAAGATTCAAGGGGATCCCTTCAGGTTGGATGATGTGGAGGGAGCTGGACACAAGTATCCAATGGTTCTTGTTCAAATTCCCATGTGCAACGAGCGCGAGGTTTACGAGCAGTCTATCTCTGCAGTCTGTCAGATCGATTGGCCAAGGGACCGTTTACTAATTCAAGTTCTTGATGATTCTGATGATGAGAACATTCAAGTGCTAATTAAGGCAGAGGTTGCTAAATGGAGCCAAAAGGGAGTGAACGTAATCTATCACCATCGATTAATAAGAACAGGATATAAAGCTGGGAATCTCAAGTCTGCAATGAGCTGTGACTATGTTAGAGACTATGAATTTGTAGCAATTTTTGATGCTGACTTTCAACCAAATCCAGATTTTCTTAAACTCACAGTTCCTCATTTCAAGGATAACCTGGAGCTCGGTTTGGTTCAGGCCAGATGGTCTTTCGTGAACAAGGACGAAAACTTGCTGACACGTCTTCAGAACATTAACTTGTGTTTCCATTTTGAGGTAGAACAGCAGGTTAATGGAGTGTTTCTTAATTTCTTCGGTTTCAATGGCACTGCTGGTGTTTGGAGAATTAAAGCCCTCGAGGAGTCCGGAGGATGGCTCGAAAGAACAACAGTAGAGGATATGGATATAGCTGTGAGAGCCCATCTTAACGGCTGGAAATTTGTATTTCTAAACGACGTTAAGGTTCTTTGCGAAGTTCCCGAGTCGTATGAAGCATATAGGAAGCAGCAACATCGTTGGCATTCCGGTCCTATGCAACTATTCAGGTTGTGTCTTCCAGCAATCATAAGTTCTAAGATAGCAGCATGGAAAAAGGCAAATTTGATACTGATTTTCTTTCTATTAAGGAAGCTCATCCTTCCCTTCTATTCCTTCACGTTGTTCTGCATAATTCTTCCTCTAACCATGTTCGTACCCGAAGCCGAGCTTCCTCTATGGGTAGTCTGCTACGTGCCCGTCTTCATGTCCTTACTCAACATCCTTCCATCCCCAAAATCTTTTCCTTTTATCATCCCCTACCTTCTTTTCGAGAACACTATGTCTGTCACCAAATTCAATGCCATGGTATCTGGCTTATTCCAGCTCGGTAGCTCTTATGAGTGGATTGTGACTAAAAAAGCTGGCCGGTCCTCCGAATCCGACTTACTGGCTACTGCTGAAAGGGACTCGAAGGTAATGAATCAAGCGCTGATCTATAGAGGCGCTTCTGAGAGCGAGCTTTCTGAGTTGAGCCACTTAAAGGAATGCGAAAAAGTAGTCGCTGCACCTGTCAAAAAAGTTAACAAGATATATCGGAAAGAGCTAGCGCTCGCGTTTCTTTTACTTTTAGCTTCACTCAGGAGTCTCTTGGCTGCACAAGGAGTCCACTTCTACTTCTTGATGTTCCAAGGTGTGACCTTCCTCCTTGTAGGCCTTGATCTAATTGGAGAGCAAATGAGCTAA 2088 44.01 MAPRLGFLCWWGTEKDSQKGTPVVVTMEKPNFSVVEIDGPDAAFRPVEKSRGKNAKQVTWVLLLKANRAVGCITWLVTVLWALLGTIKKRLIYRQGVAIEGGKLGRGRLLFGVIRAFLVTSMAILAFEMLAYFRGWHYFQNPNLHIPQASDLQGLLHSLYVAWLTFRADYIAPLIQTLSKFCIVLFLIQSVDRMILCFGCLWIKCKRIEPKIQGDPFRLDDVEGAGHKYPMVLVQIPMCNEREVYEQSISAVCQIDWPRDRLLIQVLDDSDDENIQVLIKAEVAKWSQKGVNVIYHHRLIRTGYKAGNLKSAMSCDYVRDYEFVAIFDADFQPNPDFLKLTVPHFKDNLELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFVFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIISSKIAAWKKANLILIFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPLWVVCYVPVFMSLLNILPSPKSFPFIIPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKAGRSSESDLLATAERDSKVMNQALIYRGASESELSELSHLKECEKVVAAPVKKVNKIYRKELALAFLLLLASLRSLLAAQGVHFYFLMFQGVTFLLVGLDLIGEQMS 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11087078 11089976 - Carg21181-RA Car01g01200 142064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01200 695 Pfam Glycosyl transferase family group 2 324 526 IPR001173 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01200 Car-Chr1:11087078 Car15g00304 Car-Chr15:1646301 0 dispersed
Car01g01200 Car-Chr1:11087078 Car09g00462 Car-Chr9:2571021 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01200 - - csv:101217415 1277.69