Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01203 ATGTGGTTACCAAGATACAGCTTAGACAGAAAAGAGAGATTGAATGTGAATGGATTTGTGGCGGTGGCCATTGACAAAGACAAAGGCAGCCAAGGGGCTCTCAAATGGGCAATTGATCATTTGCTTCGCAGAGGCCAAACTGTTTTCCTCGTTCATGTCAAACTCAGATCCCTTTCTAATTCTTCCCTAAAGATGAAATCTGACCCTGAAGCTGGCGTTAGAGAATTATTCCTTCCTTTTCGTTGCTTTTGTACTCGAAAAGATATTCAATGCAAAGATGTTGTGTTGGAAGATACAGACATAGCTAAGGCCTTAACTGAGTATGCTGCAAATACAGCCATAGAGAACATTGTTGTGGGAGCTTCATCAAAATCTGGCTTTTTAAGATTCAAGGCAACTGATGTTCCTGGCAATGTCTCAAAAGGAGCACCAGATTTTTGCAATGTGTTTGTCATTTCTAAAGGCAAAATTCAATCGATGCGTTCGGCATCTCGTCCCGCTCCGGTCGTGAATCCTCTACAGTCGCAATTAGTGCAACAAAGCAGCACAAAATCCATCAGGTCCGACTACCAATTTCCTCAGACTACATCTGCAAGAGCCTCTTTGGATAAACGTCCCTTTGTTCTGCCACGTAGATCGCAGGACGAGGCTGATTTCATGAGCTCAGGAAGACCGAGCATTGATCGTATATTTCCTTCAGTTTATGACAGCCTAGATATGGGAGGAAGAGCCACCCCACCACGGATGTCGAGTAGTACAGATCTTGACTTGACTCAGAGCTTCGAGTCTCTACCGATGGGACGGTTATCGATGGATATGAACTTCCCGTCCGAGTTCTCTTCGATCTCGCAAGATAGTGATAGATTGTCAATCTCATCACAGTCTTTGGAAGATGTGGAGGCTGAGATGCGTAGGCTCAAGCTAGAACTCAAGCAAACCATGGAAATGTACAGCACAGCCTGCAAGGAAGCACTTACAGCAAAACAAAAGGCGGTCGAGCTGCAACGCTGGAAATTAGAAGAAGAACAAAGAATAGAAGAGGCGAGATTGGCTGGGGAAGCTGCATTGGCGCTGGCCGAACAGGAGAAGGCGAAGTCGAAAGCAGCCATCGAGGCAGCAGAGGCAGCTAGGAGGATAGCAGAATTGGAAGCACAGAAAAGAATGAAGGCTGAAATGAAAGCTCACAAAGAAGCTGAAGAAAAGAAAAGGGCTATTGATGCATTGTCACAAAGCGATATCAGGTATAGAAAGTATACGATCGAGGAGATCGAAGAGGCAACGGAATTCTTTGCTGAATCTCGTAAGATCGGAGAAGGCGGTTATGGTCCAGTTTACAAGTGTGATCTTGATCATACTCCTGTTGCCATTAAGGTTTTACGTCCCGATGCAACTCAAGGACGATCGCAGTTTAAACAAGAGGTAGAAGTACTTAGCTGTATACGCCATCCAAACATGGTGCTCCTCCTTGGAGCGTGCCCCGAGTACGGCTGCTTGGTCTACGAGTTCATGGCTAATGGGAGCTTAGAAGATCGACTTCTACAACGAGGAAACACGCCTCCACTTTCGTGGCAGCTCAGGTTTCAAATTGCAGGTGAAATTGGAACAGCATTGTTGTTCCTACACCAAACAAAGCCAGAGCCACTCGTGCATCGTGATCTCAAACCAGCTAATATTTTGCTCGATCGTAACTTTGTTAGTAAGATCAGTGACGTCGGCTTAGCTAGGCTCGTACCTCCATCGGTTGCGGATAACGTAACACAGTACCGAATGACATCGACTGCTGGAACGTTTTGCTACATTGATCCCGAGTATCAGCAGACAGGCATGCTTGGTGTGAAATCAGACATATACTCATTAGGCATCATGTTTCTCCAGCTGATAACTTCTCGGCCGCCAATGGGATTGACTCACCATGTTGAACGAGCGATCGAGAATGATATGTTTGCAAATATTCTCGATCCAGCCGTTACCGATTGGCCTGTCGAAGAAGCGTTGTCGTTCGCCAAGATGTCGCTCAAGTGTGCCGAGTTAAGACGTAAAGATAGGCCTGATCTTGGAAAGGAAATCCTTCCCGAGCTTAACAGGTTGAGAACTATTGCAGAAGATTATATACACCCAACACTGATGGGAGACATAAGCAGCCCCACTCGCAGCAGCAGCCAAGTTTCTCTACCGTTG 2178 46.1 MWLPRYSLDRKERLNVNGFVAVAIDKDKGSQGALKWAIDHLLRRGQTVFLVHVKLRSLSNSSLKMKSDPEAGVRELFLPFRCFCTRKDIQCKDVVLEDTDIAKALTEYAANTAIENIVVGASSKSGFLRFKATDVPGNVSKGAPDFCNVFVISKGKIQSMRSASRPAPVVNPLQSQLVQQSSTKSIRSDYQFPQTTSARASLDKRPFVLPRRSQDEADFMSSGRPSIDRIFPSVYDSLDMGGRATPPRMSSSTDLDLTQSFESLPMGRLSMDMNFPSEFSSISQDSDRLSISSQSLEDVEAEMRRLKLELKQTMEMYSTACKEALTAKQKAVELQRWKLEEEQRIEEARLAGEAALALAEQEKAKSKAAIEAAEAARRIAELEAQKRMKAEMKAHKEAEEKKRAIDALSQSDIRYRKYTIEEIEEATEFFAESRKIGEGGYGPVYKCDLDHTPVAIKVLRPDATQGRSQFKQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMANGSLEDRLLQRGNTPPLSWQLRFQIAGEIGTALLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADNVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITSRPPMGLTHHVERAIENDMFANILDPAVTDWPVEEALSFAKMSLKCAELRRKDRPDLGKEILPELNRLRTIAEDYIHPTLMGDISSPTRSSSQVSLPL 726
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11104296 11109140 - Carg21184-RA Car01g01203 142067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01203 726 Pfam Protein kinase domain 431 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01203 726 Coils Coil 356 402 - -
Car01g01203 726 Coils Coil 322 342 - -
Car01g01203 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 548 560 IPR008271 GO:0004672|GO:0006468
Car01g01203 726 Pfam Universal stress protein family 21 144 IPR006016 -
Car01g01203 726 ProSiteProfiles Protein kinase domain profile. 430 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01203 726 Coils Coil 289 316 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01203 Car-Chr1:11104296 Car16g00601 Car-Chr16:3847962 0 dispersed
Car01g01203 Car-Chr1:11104296 Car12g00262 Car-Chr12:1752480 9.83E-98 wgd
Car01g01203 Car-Chr1:11104296 Car05g00561 Car-Chr5:3293190 2.90E-73 wgd
Car01g01203 Car-Chr1:11104296 Car09g00466 Car-Chr9:2597386 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88606 PF00069 Pkinase 1.90E-39 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01203 - - csv:105435028 1154.04