Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01225 TTGGTGAATTCTGGAGGTGGATTTGATTGGAATTGGGGCTTTTGTGTTGATTTGGTGGAGATGACTCTGCTCTGTTGTTTTAATGCTTCATACTCTCGGATTAGATCGGCGTTAAACTACGGTAAAGGACGAAGCCACGAGGGGCTTATCAAGTACGGGTTCTGCCTGGTAAAAGGGAAAGCTAATCATCCCATGGAAGATTACCATGTTGCTAAGTTTGTTCAGATTCAAGAACATGAACTGGGGCTCTTTGCCATTTACGATGGCCATTTAGGAGAAAATGTGCCTGCCTATTTACAAAAGCATTTGTTTTCTAATATCCTGAAGGAGGACGAGTTTTGGGTCGATCCCAACGGCTCCATCTCGAAAGCCTATGAGAAGACAGACCAAGCCATTCTATCCCACAGCTCCGACTTGGGTCGTGGTGGATCAACTGCAGTTAATGCTATTCTGATTAACGGTCGACGATTATGGGTGGCCAATGTTGGAGATTCTCGTGCAGTTCTTTCAAGAGGGGGTGAAGCTATACAGATGAGCATCGACCATGAGCCGAGTACGGAGCGTGGCATCATTGAGAATAAAGGGGGTTTCGTTTCGAACATGCCAGGAGACGTACCTCGAGTGAATGGTCAGCTAGCAGTGTCACGAGCATTTGGAGACAAGAGTCTCAAATCTCACCTGCGATCGGATCCCGATATACAAGATATCAACATAGATGCCAACATGGACTTATTAATTCTCGCCAGTGACGGTCTATGGAAGGTAATGGCGAATCAAGAAGCGGTCGATATCGCTCGAAGAATCAAAGACCCATTGAAGGCTGCTAAGCAGTTAATAACTGAGGCTTTGCAGAAAGAGAGTAAAGATGATATATCATGCATTGTGGTTAGATTTAGGTGA 900 45.22 LVNSGGGFDWNWGFCVDLVEMTLLCCFNASYSRIRSALNYGKGRSHEGLIKYGFCLVKGKANHPMEDYHVAKFVQIQEHELGLFAIYDGHLGENVPAYLQKHLFSNILKEDEFWVDPNGSISKAYEKTDQAILSHSSDLGRGGSTAVNAILINGRRLWVANVGDSRAVLSRGGEAIQMSIDHEPSTERGIIENKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQDINIDANMDLLILASDGLWKVMANQEAVDIARRIKDPLKAAKQLITEALQKESKDDISCIVVRFR 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11254086 11257226 + Carg25629-RA Car01g01225 142089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01225 299 Pfam Protein phosphatase 2C 60 291 IPR001932 -
Car01g01225 299 ProSiteProfiles PPM-type phosphatase domain profile. 51 298 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01225 Car-Chr1:11254086 Car04g00370 Car-Chr4:2105137 5.95E-156 dispersed
Car01g01225 Car-Chr1:11254086 Car09g00489 Car-Chr9:2729001 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01225 K17506 - csv:101213414 523.472