Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01226 ATGGCGAAAGAGAGAGAACTACTCGTTTACTATGCAAGATTGGCAGAGCAGGCCGAGAGATATGAAGAGATGGTTGAGGAAATGAAGAAAATTGTGAAGTTAAACGTGGAATTGACAGTGGAAGAGAGAAATCTGCTTTCTGTTGGCTATAGGAATGTAATAGGAGCTAGACGAGCTTCATGGCGCATTTTGTCTTCAATTGAACAGAAGGAGATAACCAATCATAATGAGAAGAATGTGGAACGGATAATTGAGTATAGGCATCGGGTAGAAGATGAGCTCTCTAAAATATGCAGTGACACATTGTCAAATATTGACCAGCATCTCCTTCCAAGTTCATCAGCTGGAGAATCTACTGTATTCTACCATAAGATGAAAGGAGATTACTGTCGGTATTTGGCAGAGTTTAAATCTGGTGATGAGCGTAAACAAGTTGCAGAACAGTCATTAAAGGCTTATGAGGCTGCTTCGACTATTGCTAACTCTGATTTGCCTCCCACTCATCCTATAAGACTTGGCCTGGCTCTGAACTTCTCTGTTTTCTACTATGAGATTTTGAATTCCCCTGAAAGGGCTTGCCACCTTGCCCAGATCGCCTTTGATGAGGCCATTGCAGAACTTGGCAGTCTCAATGAAGATTCCTACAAGGACAGTTCCCTCGTTTTGCAGCTTCTCAGGGACAATCTAACCCTGTGGACTTCCAATTTGCCAGACGAAGGAGAGCAATCCAATGCCGATGAACTCTAG 747 42.97 MAKERELLVYYARLAEQAERYEEMVEEMKKIVKLNVELTVEERNLLSVGYRNVIGARRASWRILSSIEQKEITNHNEKNVERIIEYRHRVEDELSKICSDTLSNIDQHLLPSSSAGESTVFYHKMKGDYCRYLAEFKSGDERKQVAEQSLKAYEAASTIANSDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAQIAFDEAIAELGSLNEDSYKDSSLVLQLLRDNLTLWTSNLPDEGEQSNADEL 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11259232 11262391 - Carg25630-RA Car01g01226 142090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01226 248 Coils Coil 11 34 - -
Car01g01226 248 Pfam 14-3-3 protein 12 233 IPR023410 -
Car01g01226 248 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Car01g01226 248 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Car01g01226 248 PRINTS 14-3-3 protein zeta signature 117 139 IPR000308 -
Car01g01226 248 PRINTS 14-3-3 protein zeta signature 152 178 IPR000308 -
Car01g01226 248 PRINTS 14-3-3 protein zeta signature 179 205 IPR000308 -
Car01g01226 248 PRINTS 14-3-3 protein zeta signature 206 235 IPR000308 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01226 Car05g00448 CCT
Car01g01226 Car05g00448 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01226 Car-Chr1:11259232 Car19g00808 Car-Chr19:8705985 7.87E-136 dispersed
Car01g01226 Car-Chr1:11259232 Car01g01232 Car-Chr1:11298726 1.22E-114 proximal
Car01g01226 Car-Chr1:11259232 Car05g00448 Car-Chr5:2561609 5.09E-141 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01226 K06630 - csv:101213169 429.483