Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01227 ATGGCAAAATTCAATTGCTTCTCCGTTCGATCAGGGAAGAAGAAGAAAACCAAGGATGGTTTAGAATCGCAAATGCCTGCTGAATTGAATAGTTTGACGAAGACCTTGCAAGTCAGCATCCATCACACTGAGGAGTCTTTTCAAGATGGAGAAGCGAAGTCATCGACCATGGACGTCGCAATTCTGTACCCGTCTGAGAATAATTCTAAGCTGGATGTTAAGGTAACGAACAATGAGAATCCTGTAGGAGGAGGAGGAGCAGTAGAAGCTGCATATGAAGGGGAAGACGAGCGTGATGACAACTCCATCAAGAGGAACCTTTCTGACTTTGATCTCGCTGCTCAAGACACCTGTGGAGAGGAATTTGAGTTTCGGTTTTCTACTTCGTTGGAAAAACAATTTGATAATACCGTCGTTGAAGGTGGAGAAGAGGCTGATGCGATCCAAACTGGACATGTTAGTGATCCTGGAATTGGTAAGGCAGTATGTTGGGCATCGCCTAAACTTAAACGCTCCTGCTCTAATCTGGAAACCAGGGATGTGCTTAGAGATCTATCTCATCCGATGCCCCCTTCAAAGTCTCAGTCTTTTGAGAAACTGCAAGAATTGGCTGACAAAATGTGGAACTATGTCGAGCCAGGCAGTCCAGAATCTATTATGACCCATCGCAGTGCTGATAAAGTGATGTTGAAGAAGCGTTCTTCGAGCCAGATTCTGCCTTCCAGAAGTAGAAGGTTGTGGTGGAAGTTGTTCCTGTGGACATCTTCCCTAAGAAGAGTGGATGAGTGGGTGAAGGATCTTCAAATTGAGCCATGTCTTTCGATCGACAACATTAGAGATGACAACGATGAAGATACTTTCTCCCCGCCATATCCCGAGAGAACTGCAAGTCACACAGCTCGACGTGGAGAACTCAATCTTACAGAAGAGATTTTGCACGCAAATAGCGTCATCCAATCTCTGAATTCTTCCTCGACCGTGGCTCACATCTCTGGTATTGGCTTAAAAGCCATACCCACAATCTCACACCTATCCGGTCTTAGATCCATCAATTTGTCCGGCAACCTCATAGTTCACATCAACTCTGGATCACTGCCCAAGGGGCTGCACACTCTTAACTTGTCCAGGAACAAGATCAGCGCCATTGAAGGACTCAAAGAATTAACACGTCTTCGAATCCTCGACCTGAGTTACAATCGCATTTCTCGCATAGGACATGGGCTGTCAAATTGTGCGATTATCAAGGAACTTCATCTCGCTGGCAACAAGATTAGTGATGTCGAGGGACTACATCGACTCTTGAAGCTCACTGTACTCGACCTGAGCTTCAACAAGATTTCAACAACCAAAGCTCTGGGCCAACTTGTAGCCAACTATAACTCTCTTCAAGCTCTTAATCTGTTGGGAAATCCAATTCAAAGCAACGTGAGTGATGAGCAGCTTCGCAAGGCCGTTATTGGCCTTCTTCCAAACCTTGTTTATCTAAACAAGCAGGCCATCAAAGCACAGAGAGCTCGAGAAGCAGCGACCGATAGCATTGCTAAAGCAGCACTGGGAGGGAACAGTAGTTGGAATTCTCGCAGAAGATCATCAAGGAAAACAAGCCAGATGATTGCATCGTCTTCAATTAGTGGGCGGAGGAGCAGCACTGCAAGTGTTGCTGCACACAAAGGCAGGCACAGATCAAAAGCGCCAACCCCGCGCCCTTCTTCTCTGGGGTTGGCTTCATCTCGTTAA 1737 46.23 MAKFNCFSVRSGKKKKTKDGLESQMPAELNSLTKTLQVSIHHTEESFQDGEAKSSTMDVAILYPSENNSKLDVKVTNNENPVGGGGAVEAAYEGEDERDDNSIKRNLSDFDLAAQDTCGEEFEFRFSTSLEKQFDNTVVEGGEEADAIQTGHVSDPGIGKAVCWASPKLKRSCSNLETRDVLRDLSHPMPPSKSQSFEKLQELADKMWNYVEPGSPESIMTHRSADKVMLKKRSSSQILPSRSRRLWWKLFLWTSSLRRVDEWVKDLQIEPCLSIDNIRDDNDEDTFSPPYPERTASHTARRGELNLTEEILHANSVIQSLNSSSTVAHISGIGLKAIPTISHLSGLRSINLSGNLIVHINSGSLPKGLHTLNLSRNKISAIEGLKELTRLRILDLSYNRISRIGHGLSNCAIIKELHLAGNKISDVEGLHRLLKLTVLDLSFNKISTTKALGQLVANYNSLQALNLLGNPIQSNVSDEQLRKAVIGLLPNLVYLNKQAIKAQRAREAATDSIAKAALGGNSSWNSRRRSSRKTSQMIASSSISGRRSSTASVAAHKGRHRSKAPTPRPSSLGLASSR 578
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11267398 11269406 + Carg25631-RA Car01g01227 142091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01227 578 ProSiteProfiles Leucine-rich repeat profile. 390 412 IPR001611 GO:0005515
Car01g01227 578 MobiDBLite consensus disorder prediction 520 551 - -
Car01g01227 578 ProSiteProfiles Leucine-rich repeat profile. 413 434 IPR001611 GO:0005515
Car01g01227 578 MobiDBLite consensus disorder prediction 520 578 - -
Car01g01227 578 ProSiteProfiles Leucine-rich repeat profile. 368 389 IPR001611 GO:0005515
Car01g01227 578 ProSiteProfiles Leucine-rich repeat profile. 435 456 IPR001611 GO:0005515
Car01g01227 578 Pfam Leucine-rich repeat 348 452 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01227 Car09g00489 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01227 Car-Chr1:11267398 Car19g00745 Car-Chr19:8329490 5.31E-75 dispersed
Car01g01227 Car-Chr1:11267398 Car09g00489 Car-Chr9:2729001 2.23E-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01227 - - csv:101212929 502.671