Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car01g01232 | ATGGCGGTCGCCTCTTCCCCTCGTGAGAAGTATGTTTACATGGCCAAGCTCGCCGAGCAGGCCGAGCGCTACGAGGAGATGGTTGAGTTTATGGAGAAGGTCTCGGCCGCCATAGAAAACGAGGAGCTTACCGTCGAGGAGCGGAACCTTCTCTCTGTTGCTTACAAGAATGTTATTGGAGCTCGTAGAGCTTCCTGGAGGATCATTTCTTCCATCGAGCAGAAGGAGGAGAGCCGAGGGAACGATGATCATGTTTCCGTGATCAGAGAATACAGATCTAAGATCGAGAGCGAGCTCTCTAACATCTGTGATGGGATCCTCAAGCTTCTTGACTCCCGCCTTATTTCCTCTGCTGCTTCTGGAGATTCCAAGGTGTTTTATCTCAAAATGAAGGGTGATTACCATAGATACCTGGCTGAATTCAAGACCGGAGCAGAACGGAAGGAGGCTGCTGAAAGTACCCTCACTGCTTATAAATCTGCTCAGGATATCGCAAATTCTGAACTTGCTCCTACTCACCCCATACGACTTGGGCTGGCTTTGAACTTTTCAGTGTTCTATTACGAGATTCTGAATTCCCCTGATCGAGCTTGCAGCCTTGCCAAACAGGCTTTTGATGAAGCAATTGCTGAGTTGGATACACTGGGCGAGGAATCATACAAGGACAGCACTTTGATCATGCAACTTCTTCGTGACAACCTCACCCTATGGACTTCAGACATGCAGGATGATGGAGATGAGATTAAAGAAGCAGCTCCCAAGCGCGACGACGAATAA | 777 | 48.65 | MAVASSPREKYVYMAKLAEQAERYEEMVEFMEKVSAAIENEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIREYRSKIESELSNICDGILKLLDSRLISSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKSAQDIANSELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGDEIKEAAPKRDDE | 258 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 11298726 | 11301825 | + | Carg25636-RA | Car01g01232 | 142096 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car01g01232 | 258 | SUPERFAMILY | 14-3-3 protein | 7 | 240 | IPR036815 | - | |
Car01g01232 | 258 | Gene3D | - | 1 | 252 | IPR036815 | - | |
Car01g01232 | 258 | SMART | 1433_4 | 8 | 250 | IPR023410 | - | |
Car01g01232 | 258 | PANTHER | 14-3-3 PROTEIN | 4 | 253 | IPR000308 | - | |
Car01g01232 | 258 | PRINTS | 14-3-3 protein zeta signature | 42 | 71 | IPR000308 | - | |
Car01g01232 | 258 | PRINTS | 14-3-3 protein zeta signature | 91 | 115 | IPR000308 | - | |
Car01g01232 | 258 | PRINTS | 14-3-3 protein zeta signature | 122 | 144 | IPR000308 | - | |
Car01g01232 | 258 | PRINTS | 14-3-3 protein zeta signature | 157 | 183 | IPR000308 | - | |
Car01g01232 | 258 | PRINTS | 14-3-3 protein zeta signature | 184 | 210 | IPR000308 | - | |
Car01g01232 | 258 | PRINTS | 14-3-3 protein zeta signature | 211 | 240 | IPR000308 | - | |
Car01g01232 | 258 | Coils | Coil | 14 | 41 | - | - | |
Car01g01232 | 258 | ProSitePatterns | 14-3-3 proteins signature 2. | 220 | 239 | IPR023409 | - | |
Car01g01232 | 258 | ProSitePatterns | 14-3-3 proteins signature 1. | 48 | 58 | IPR023409 | - | |
Car01g01232 | 258 | PIRSF | 14-3-3 | 2 | 250 | IPR000308 | - | |
Car01g01232 | 258 | PANTHER | 14-3-3-LIKE PROTEIN GF14 CHI-RELATED | 4 | 253 | - | - | |
Car01g01232 | 258 | Pfam | 14-3-3 protein | 14 | 238 | IPR023410 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car01g01232 | Car05g00457 | CCT | |
Car01g01232 | Car09g00495 | CCT | |
Car01g01232 | Car12g00154 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car01g01232 | Car-Chr1:11298726 | Car05g00505 | Car-Chr5:2929181 | 8.52E-133 | dispersed | |
Car01g01226 | Car-Chr1:11259232 | Car01g01232 | Car-Chr1:11298726 | 1.22E-114 | proximal | |
Car01g01232 | Car-Chr1:11298726 | Car12g00154 | Car-Chr12:881107 | 7.58E-176 | wgd | |
Car01g01232 | Car-Chr1:11298726 | Car05g00457 | Car-Chr5:2622520 | 1.27E-175 | wgd | |
Car01g01232 | Car-Chr1:11298726 | Car09g00495 | Car-Chr9:2767971 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car01g01232 | K06630 | - | csv:101210822 | 489.189 |