Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01260 ATGTTCCCAAAACCCCACCATCAACCACCGCCCCATTTCCAGCCCTTTCCCCGCTCCTTCGCCGTCGCGGCCACTCCGCCACCGCGAGATTCTTCCACCGCCGCCGATGACGACTCCACTACCGGCCACTCGCCTCTCACGCACGCTATGCTCCCTAAAGAACCGGCCTCCGGCGGCGACGGAGCTTCTATCGAGGTCGTTCGCCGTCCCCGTGGTCGACCTCCTGGATCCAAGAACAAGCCGAAGCCAGCCGCCGTTGTCGTCGCTGCACGCGACGCCGAGCCGGCGATGAGTCCTTATGTGCTCGAAGTTCCTGGCGGCAGTGATATCGTCGAGGCTATTTCCCGATTCTGCCGCCGCAGAAACACAGGGCTCTGTATTCTCAACGCTTATGGAAGCGTCGCCGATGTCACACTCCGGCAGCCGTCCTCATCTCCGGTGGCGACCGTCACTTTCCATGGACGATTCGATATCCTTTCCGTCTGCGCTACTTTTGTTCCTCATACGACGTCGTTTCCAATCCCTAACGGATTCACCATCACGCTAGCAGGGCCGCAGGGCCAGATCTTCGGCGGTTTGGTTGCCGGAGCTTTAATCGGCGCCGGAACCGTCTTTGTAATAGCTGCCTCATTCAACAATCCCTCCTATCAACGGCTTCCATCAGAGGACGAGGTCAGAAAATCAGGCTTCAGCGATGTCGAAGAAGGTCACTCTCCACCGATCTCCGGTGGAAAAGATAGCGAAAACACCAACGCCGCAGCGGATACCTGCGGCCTGTTGCCGATGTACAGTACTCACTCTTCCTCCGATGCAATATGGTCTCGACAACCAGCGGCGCCGCCGCACCATCGCCAGTACTAA 861 58.77 MFPKPHHQPPPHFQPFPRSFAVAATPPPRDSSTAADDDSTTGHSPLTHAMLPKEPASGGDGASIEVVRRPRGRPPGSKNKPKPAAVVVAARDAEPAMSPYVLEVPGGSDIVEAISRFCRRRNTGLCILNAYGSVADVTLRQPSSSPVATVTFHGRFDILSVCATFVPHTTSFPIPNGFTITLAGPQGQIFGGLVAGALIGAGTVFVIAASFNNPSYQRLPSEDEVRKSGFSDVEEGHSPPISGGKDSENTNAAADTCGLLPMYSTHSSSDAIWSRQPAAPPHHRQY 286
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 11456219 11457079 - Carg20848-RA Car01g01260 142124
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car01g01260 286 MobiDBLite consensus disorder prediction 1 16 - -
Car01g01260 286 ProSiteProfiles PPC domain profile profile. 94 234 IPR005175 -
Car01g01260 286 MobiDBLite consensus disorder prediction 1 84 - -
Car01g01260 286 MobiDBLite consensus disorder prediction 32 46 - -
Car01g01260 286 MobiDBLite consensus disorder prediction 218 253 - -
Car01g01260 286 Pfam Plants and Prokaryotes Conserved (PCC) domain 99 213 IPR005175 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01260 Car-Chr1:11456219 Car05g00497 Car-Chr5:2875366 4.91E-86 dispersed
Car10g00817 Car-Chr10:4510276 Car01g01260 Car-Chr1:11456219 2.17E-47 dispersed
Car01g01260 Car-Chr1:11456219 Car12g00177 Car-Chr12:1096114 2.55E-91 wgd
Car01g01260 Car-Chr1:11456219 Car09g00523 Car-Chr9:2938508 3.03E-172 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01260 - - jre:109013700 290.426