Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01289 ATGATGATCATTAGTGACCTCGTTTCCACTTATAGAGGTGAGGGTAAATGGTTTATATACGTTCTATTTGATGTCAGATCGAAATGGGCATTTACCTCAGCAATCCTAAAACTGAGAAGGCCTCTGAAGATGGTGAAAATAGTCGTCTTAGATTTGGACTATCGTCCATGCAAGGATGGCGTGCCACAATGGAAGATGCTCATGCCGCAATTCCTGATCTGGATGCTTGCACTTCCTTCTTTGGCGTTTATGATGGCCATGGAGATGTTCAACAATCCAGGTAAGGTGGTTGCGAAGTTCTGTGCTAAGTACCTACATCAGCAAGTGAAGAAAAATGACGCTTATGCAGCTGGAGATATAGGAACTTCTGTGCAGAAAGCATACTTGAGAATGGATGAAATGATGCGTGGACAAAGAGGATGGAGAGAATTAGCTATTTTGGGTGACAGATTGAACAAGTTCACTGGCATGATAGAGGGGTTAATCTGGTCACCAAAAAGCAGTGACGCAAATGACCAGGCTGATGATTGGGCTTTTGAGGAGGGTCCGCACTCTGATTTTTCTGGCCCAACTTCGGGGTGTACAGCTTGTGTTGCAATTATTAGAAATAACAAACTTATTGTTGCAAATGCTGGTGATTCACGTTGTGTGATATCAAGGAAGGGCCAGGCTCACAGCCTCTCTAGGGATCACAAACCTGATCTTGAGATTGAGAGGGACAGAATTCTTAAAGCTGGTGGTTTTATTCATGCTGGACGGGTCAATGGTAGCTTGAACCTTGCCAGAGCTATTGGTGATATGGAATTTAAGCAGAATAAATTTTTACCTGCTGAAAAGCAGATTATCACTGCAAATCCTGATGTAACCACTGTTGAGCTTTGCGACGATGACGAGTTTATTGTGATAGCCTGTGACGGGATATGGGATTGCATGTCTAATCAGCAGCTAGTAGATTTTATACATGAACAGCTACAATCACTTAAGAAAGATATCCAATCAAACTCCTCTGTCGACGAGCAAACTTCACCCGCTACCGCCACCGCCACCACCAAACCAGACAGTACCAAATCGAAGGAAGGAGATGAATCGAACTAG 1095 43.56 MMIISDLVSTYRGEGKWFIYVLFDVRSKWAFTSAILKLRRPLKMVKIVVLDLDYRPCKDGVPQWKMLMPQFLIWMLALPSLAFMMAMEMFNNPGKVVAKFCAKYLHQQVKKNDAYAAGDIGTSVQKAYLRMDEMMRGQRGWRELAILGDRLNKFTGMIEGLIWSPKSSDANDQADDWAFEEGPHSDFSGPTSGCTACVAIIRNNKLIVANAGDSRCVISRKGQAHSLSRDHKPDLEIERDRILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIITANPDVTTVELCDDDEFIVIACDGIWDCMSNQQLVDFIHEQLQSLKKDIQSNSSVDEQTSPATATATTKPDSTKSKEGDESN 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11625862 11633888 - Carg10748-RA Car01g01289 142153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01289 364 MobiDBLite consensus disorder prediction 331 364 - -
Car01g01289 364 ProSiteProfiles PPM-type phosphatase domain profile. 73 364 IPR001932 -
Car01g01289 364 MobiDBLite consensus disorder prediction 331 353 - -
Car01g01289 364 Pfam Protein phosphatase 2C 168 329 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01289 Car-Chr1:11625862 Car08g00498 Car-Chr8:3151221 1.67E-143 dispersed
Car01g01289 Car-Chr1:11625862 Car17g00854 Car-Chr17:7209200 1.83E-142 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01289 K17499 - csv:101211604 462.996