Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01290 ATGCAGGAAGATAAGTCGGTGATAAGTTTGAGACCAGGTGGTGGCGGTGGCGTTCGTGGAAGCAGATTTGCTACTACTCGCTTCGATTCATCCTCTGCCAATTCTTCGTCGCTTCGTCCTCATGGCGGCGTTACGTTAACCCTGAAGACTGGAGATCTACGGTTTGAAGGTCGTGAGCGAATCCAGTACACTCGAGACCAGATTCTGCAGCTTAGAGAGGTTGCAACAGTCCCTGAGGATATCTTGAAGGTCAAATTAGAAGTTGAGACAGAGATTTTTGGGGAGGATCAAACATGGGCTCGTGCTGAAAACATTCAGCAATCGCAATCTCAAGGTCGTTACTTTGAGCCAGACAATCGAGATTGGCGTGGTCGATCTGGGCAGTTACCTGTCTCTGCAGAGGAAGGATCTTGGGATGCAATTCGTGAGGATAAGGATTTATCAGGTCAATCTCAGTCGAGGTTGTATGACTCTAATAATAGGAGTCAAGCTTCTGGTAACCAAGGGGTTGGCACTGCACCTGCCCTCATCAAGGCCGACGTTCCTTGGTCAGTTAGAAGAGGTAATATCTCAGAAAAGGAACGTGTTTTGAAGACAGTGAAAGGTATACTTAATAAGTTGACTCCAGAAAAGTTCGACGTACTGAAGGGTCAACTGATTGACTCTGGAATTGTGTCCGCTGATATTTTGAAGGAGGTTATATCACTTTTATTTGAGAAGGCCGTGTTTGAGCCCACATTTTGCCCGATGTATGCACTTTTGTGCTCTGACCTTAATGACAAGCTTCCTCCATTCCCATCTGATGTTCCTGGAGAGAAAGATATCACTTTTAAACGTGTTCTTTTAAACATTTGCCAAGAGGCATTTGAAGGTGCTGAGCACATAAGGGCAGAAATCGGGCGGCTGACTGATCCTGAGCATGAAATGGAAAGAAGAGATAAGGAAAGAATGGTTAAGCTTCGAACTCTTGGAAACATTCGCCTGATAGGTGAGCTTCTTAAACAGAAGATGGTGACTGAAAGGATTGTTCACCATATTGTTCTGGAGCTGTTGGGGTCCGACAATAACGTATGCCCTGCTGAGGAGAATGTTGAGGCTATTTGTCAGTTTTTTAACACAATTGGCAAGCAAATGGATGAAAGCCCAAAATCTCGGCGGGTCAATGATGTATATTTCAGCCGGTTGAAGGAACTCGCTGCAAACACTCAACTAGCACCTAGGTTGAGATTTATGGTCCGTGATGTTCTTGATTTACGGGCCAATAATTGGGTTCCTAGGCGTGAAGAGGTGAAAGCAAAAACCATCACTGAAATTCATTCAGAGGCTGAGAAGAATCTAGGGCTTCGTCCCGGTTCAATGGCAATGATGAGAAATGGCCGTAATGCCGAGGCAATTGGGGGACAAAGTCCTGCTGGATTTCCTGTTGCTCGTCCTGGCTTTGGAGGTATGATGCCTGGAATGCCTCCTGGAACGAGGAAAATGCCTGGTATGCCTGGACTTGATTCGGACGATTGGGAGGTGGTTCCTAGATCCCGATCGATGCCAAGGGGCGAGCGTGCCCAGACACCATTAATTGGCAAAACACCTTCTATTAATTCAAAATATCTACCTCAGGGAAGTGGTGGTGTAATAACTGGGAAAACAAGCGCCTTGCTACAGGGCAGTGCTGCATCTCCTGCACGAACAAGTCCCACGCCTGGAATCCAGCCGGTCGCTCACAATGCTAGACCAGTTCCTCCAGTTGCATCCACCATATCCTCTCCTCAGAAGCCAACAGCTCCTGCTGTAGTATCCAATTCTGCTGATCTTCACAAAAAAACCGTTTCACTGCTCGAGGAATACTTCAGTGTACGGATTCTCGATGAAGCGCTACTGTGTGTAGAGGAGCTAAAATCTCCAGCATATCACCCCGAGGTTGTTAAACAATCTCTTACCATAGCACTTGAAAAGATTCCACCATGTGTAGACCCAGTTGTTAAGCTTCTTGACCACCTGCTTCACAAGAATGTCTTCACTGCAAAGGATATCGGTACCGGGTGCCTTCTTTACGGGTCCATGATGGATGATATAGGCATCGATTATCCGAACGTGCCAAACTTTTTCGGTGATACTCTCGGGAAGTTAATATTGATCGGGGGTTTGGATTTTTCAGTCGTCAAGGAGATCCTCGAGAAGCTCGAAGATAACTATTTCCAGAAATCCATTTTTGGTAGTGTTATGAAGATCCTCAACTCGAGCCCTTCTGGAGAAGGAATTCTGGCAACTCGAAGTGTTGAAATCCAAGCATGTGAGAATTTACTTGCGTGA 2307 46.16 MQEDKSVISLRPGGGGGVRGSRFATTRFDSSSANSSSLRPHGGVTLTLKTGDLRFEGRERIQYTRDQILQLREVATVPEDILKVKLEVETEIFGEDQTWARAENIQQSQSQGRYFEPDNRDWRGRSGQLPVSAEEGSWDAIREDKDLSGQSQSRLYDSNNRSQASGNQGVGTAPALIKADVPWSVRRGNISEKERVLKTVKGILNKLTPEKFDVLKGQLIDSGIVSADILKEVISLLFEKAVFEPTFCPMYALLCSDLNDKLPPFPSDVPGEKDITFKRVLLNICQEAFEGAEHIRAEIGRLTDPEHEMERRDKERMVKLRTLGNIRLIGELLKQKMVTERIVHHIVLELLGSDNNVCPAEENVEAICQFFNTIGKQMDESPKSRRVNDVYFSRLKELAANTQLAPRLRFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGSMAMMRNGRNAEAIGGQSPAGFPVARPGFGGMMPGMPPGTRKMPGMPGLDSDDWEVVPRSRSMPRGERAQTPLIGKTPSINSKYLPQGSGGVITGKTSALLQGSAASPARTSPTPGIQPVAHNARPVPPVASTISSPQKPTAPAVVSNSADLHKKTVSLLEEYFSVRILDEALLCVEELKSPAYHPEVVKQSLTIALEKIPPCVDPVVKLLDHLLHKNVFTAKDIGTGCLLYGSMMDDIGIDYPNVPNFFGDTLGKLILIGGLDFSVVKEILEKLEDNYFQKSIFGSVMKILNSSPSGEGILATRSVEIQACENLLA 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11635799 11641150 - Carg10747-RA Car01g01290 142154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01290 768 Pfam MIF4G domain 197 422 IPR003890 GO:0003723|GO:0005515
Car01g01290 768 MobiDBLite consensus disorder prediction 151 170 - -
Car01g01290 768 Pfam MA3 domain 604 714 IPR003891 -
Car01g01290 768 MobiDBLite consensus disorder prediction 1 43 - -
Car01g01290 768 MobiDBLite consensus disorder prediction 149 171 - -
Car01g01290 768 MobiDBLite consensus disorder prediction 105 136 - -
Car01g01290 768 MobiDBLite consensus disorder prediction 511 532 - -
Car01g01290 768 MobiDBLite consensus disorder prediction 24 43 - -
Car01g01290 768 ProSiteProfiles MI domain profile. 602 724 IPR003891 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01290 Car09g00352 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01290 Car-Chr1:11635799 Car06g01037 Car-Chr6:7831250 1.49E-68 dispersed
Car01g01290 Car-Chr1:11635799 Car10g00422 Car-Chr10:2117841 0 wgd
Car01g01290 Car-Chr1:11635799 Car02g00864 Car-Chr2:6197969 0 wgd
Car01g01290 Car-Chr1:11635799 Car09g00352 Car-Chr9:1924537 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01290 K03260 - csv:101211356 1203.35