Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01294 GCCACTCCAAACTCCCTTTTATGCCCATTCATGGCTAAAGCGGCGTCGTGTTGGAAGATATCCCGCAACTTTTTTGTTCTTCTGGGTTTGTTTGTTCCGGCCACGGCGGCCTTATCCTTCGGTTTCTATTCTGCCACGTGTCCTGCGGCGGAGTTGATTGTAAAGAATGCCGTCAGATCGGCTTCCTCCGAGGACCCCACCGTCCCCGGGAAGCTCCTCCGATTGATGTTCCATGACTGTTTCGTCGAGGGTTGTGACGCTTCTATATTACTTCAAGGAAACAAAACAGAACGAACTGATCCAGCAAACAGGTCTCTTGGAGGATTTGAAGCGATCGATTCCGCTAAAAGAACTCTAGAATTTTTTTGTCCCGGAATTGTTTCTTGTGCCGACGTCGTTGTTTTGGCCGCTAGAGATGCCGTTGAATTCGCCGGCGGGCCCTCCGTCGAAGTCCCAACCGGCCGACGAGATGGAAGGATATCGGCGGCGACAAACGTCCGACCAAACATCGTCGACACAAGCTTTTCAGTCGACCAAATGATGAGTCTCTTCTCATCAAAAGGGCTGTCGGCAGACGATCTCGTCATACTCTCAGGAGCTCACACAATCGGAACCGCCCACTGTAGCGCCTTCAGCGACCGCTTTAGAAAGGGTCCAAACGGGCAGATGACCCTCATCGACGCTTCTCTCGACGGCACTTACGCCAACGAGCTTATGCGGCGGTGCCCCGCCGGAGCCGCCTCCACCGTCGTCGTTGACAACGATCCGGCGACGGCGAATGTCTTCGACAATCAGTACTACAAAAACATTCTGACGCACAAGGGGCTGTTTCAGTCGGATTCCGCTCTGATTAGCGACGGCCGGACCAGGGCCCACGTGGAGAGATTTGCTAAGGATCAGATTGGGTTTTTTGAGAACTGGGGTCAGTCGTTCTTGAAACTTAGTAGTGTTGGAGTTAAAAGTCGGGCCGAAGGGGAAATTAGACTGTCTTGTTCTACTAATAATGTCTGA 1011 52.42 ATPNSLLCPFMAKAASCWKISRNFFVLLGLFVPATAALSFGFYSATCPAAELIVKNAVRSASSEDPTVPGKLLRLMFHDCFVEGCDASILLQGNKTERTDPANRSLGGFEAIDSAKRTLEFFCPGIVSCADVVVLAARDAVEFAGGPSVEVPTGRRDGRISAATNVRPNIVDTSFSVDQMMSLFSSKGLSADDLVILSGAHTIGTAHCSAFSDRFRKGPNGQMTLIDASLDGTYANELMRRCPAGAASTVVVDNDPATANVFDNQYYKNILTHKGLFQSDSALISDGRTRAHVERFAKDQIGFFENWGQSFLKLSSVGVKSRAEGEIRLSCSTNNV 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11658306 11660093 + Carg10743-RA Car01g01294 142158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01294 336 ProSiteProfiles Plant heme peroxidase family profile. 37 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g01294 336 Pfam Peroxidase 54 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g01294 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01294 Car09g00341 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01294 Car-Chr1:11658306 Car07g00357 Car-Chr7:1801617 4.92E-83 dispersed
Car01g01294 Car-Chr1:11658306 Car09g00341 Car-Chr9:1886758 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01294 K00430 K18328 csv:101211842 518.464