Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01296 ATGGGCTATCTGAATTCAGTCTTGTCTTGTTCGAGCCAGATTCATGCTGCTGAGGAGGCTCCTGTAAGCGGCGGGGGACTAAGCCAGAATGGAAAGTTCAGCTACGGATATGCTAGCTCTCCAGGGAAGAGATCTTCGATGGAAGATTTTTATGAAACACGTATAGATGGCGTGGACGGAGAAATAGTTGGTCTATTTGGTGTGTTTGACGGTCATGGGGGAGCACGAGCTGCAGAGTATGTGAAGCACAATCTTTTTAGTAATTTAATCAGCCATCCAAAGTTCATATCGGATACCAAATCTGCCATAGCTGATGCCTACAACCACACAGACACAGAATTTCTGAAGTCTGAAAATCATCAAAACAGAGATGCTGGATCAACCGCTTCCACTGCCATTCTAGTTGGTGATCGCTTACTTGTTGCAAATGTGGGTGATTCTAGAGCTGTTATTTGCCGGGGTGGCACTGCCATTGCTGTCTCTCGAGATCACAAGCCTGACCAAACTGATGAGCGACGACGAATTGAGGATGCAGGAGGATTTGTGATGTGGGCTGGTGAGGTTATCACATCCTTTAGCATGACATTAAAGAAAGAATGGTTGTTTGTTTCATTTTATTCACTGGAAGTTGCACGAGCAGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCACGTGCATTTGGTGATAGGTTGCTAAAGCAATATGTTGTTGCTGACCCTGAAATTCAGGAGGAAAAGATTGATAGCTCGCTCGAGTTTCTTATACTTGCTAGTGATGGGCTATGGGATGTCGTCACTAACGAGGAAGCTGTTGCCATGACGAAACCAATTCCGGACCCAGAAGAGGCGGCTAAGAGGTTGATGCTAGAAGCATATCAAAGAGGTAGCGCTGATAACATTACGTGCGTCGTCGTCCGTTTCTTGGCAAATCAGGGAAGCCCCTCCCTTGCAACATCTGGGTAA 966 46.17 MGYLNSVLSCSSQIHAAEEAPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGARAAEYVKHNLFSNLISHPKFISDTKSAIADAYNHTDTEFLKSENHQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGTAIAVSRDHKPDQTDERRRIEDAGGFVMWAGEVITSFSMTLKKEWLFVSFYSLEVARAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDSSLEFLILASDGLWDVVTNEEAVAMTKPIPDPEEAAKRLMLEAYQRGSADNITCVVVRFLANQGSPSLATSG 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11667146 11670945 + Carg10741-RA Car01g01296 142160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01296 321 Pfam Protein phosphatase 2C 63 301 IPR001932 -
Car01g01296 321 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Car01g01296 321 ProSiteProfiles PPM-type phosphatase domain profile. 34 308 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01296 Car09g00337 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01296 Car-Chr1:11667146 Car15g00584 Car-Chr15:3224526 3.50E-124 dispersed
Car16g00037 Car-Chr16:273292 Car01g01296 Car-Chr1:11667146 3.86E-31 dispersed
Car01g01296 Car-Chr1:11667146 Car09g00337 Car-Chr9:1867742 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01296 K17506 - csv:101216117 550.436