Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01302 ATGGAATCGGAGGATTCATTGATATCAAGATTGGAGGAACTGCAAAAAGACTTGAGGAAGAAACAGAGATTCGAGGAAGCAGTTTCCACCACTATATCTCTTCTTCAAGATTGCTATCCTACTGCTTCTCCTTCTCTACGCAAATCGTTCTATTCCGTAATTTGCCGAGTTGCTACAGTATTGAAGACAAGATATACGGCCCCAGGGTTTTGGTGTTCTGGTCTCAAGCTTTTTGAGGTTTCTTTGAGTCTGGTCTCTGATCCTTCTGAGAAACAACAATTACAGTCTAACATAGCTCATGCCAAGGAAATTCTGCACCAAATTGACAATCCATCTTCACCGTCACAACGTACTTCAAATGGAGGCTATCTTTTTGAGGGCCATCTCACTGTTGATCCGGAGCCACCCCAGCCCCAGTGGCTGGTGCAATCGAACCTCTTGACAGCCGCTGCAGCTACGCTATTTAACGCTGAATCTTCTCAAGCTCCGGTTGACAACAACAACAACAATTCCGAGAATGCTACTGATTTCCTTCAAGCGGTTATTGAAAATCTAGAGAACGCTGTAGATGGGTTCATGGATTTGGAAACGGTTAGCGGACCTCCGAAAGTTCCTCCAGCAAGTAAAGAAGTCGTCGAGAAACTTCCTGTAATTACTATAACAGAGGAAGTTCTTGCCAAGCTAGGAAGAGATGTACAATGTGCCATTTGCAGGGAAAACTTGGCTGTTGATGACAAGATGCAGGAATTGCCTTGCAAGCACACATTCCACCCACCTTGTTTGAAGCCATGGCTGGACGAGCATAACTCTTGCCCGATCTGTCGACACGAATTGCCCACCGACGACCATAAATATGAGAGCTGGAAGGAGCGAGAGAAGGAGGCAGAAGAAGAGAGAAAAGGAGCTGCAAATGCTGTTCGTGGCGGCGAATATATGTATATTTGA 945 45.4 MESEDSLISRLEELQKDLRKKQRFEEAVSTTISLLQDCYPTASPSLRKSFYSVICRVATVLKTRYTAPGFWCSGLKLFEVSLSLVSDPSEKQQLQSNIAHAKEILHQIDNPSSPSQRTSNGGYLFEGHLTVDPEPPQPQWLVQSNLLTAAAATLFNAESSQAPVDNNNNNSENATDFLQAVIENLENAVDGFMDLETVSGPPKVPPASKEVVEKLPVITITEEVLAKLGRDVQCAICRENLAVDDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDHKYESWKEREKEAEEERKGAANAVRGGEYMYI 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11713951 11716437 + Carg10735-RA Car01g01302 142166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01302 314 Pfam Ring finger domain 233 275 IPR001841 -
Car01g01302 314 ProSiteProfiles Zinc finger RING-type profile. 234 275 IPR001841 -
Car01g01302 314 Coils Coil 168 188 - -
Car01g01302 314 Coils Coil 1 21 - -
Car01g01302 314 Coils Coil 285 305 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01302 Car-Chr1:11713951 Car03g00232 Car-Chr3:3592274 3.14E-23 dispersed
Car01g01302 Car-Chr1:11713951 Car18g00086 Car-Chr18:456093 1.06E-26 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01302 K16274 - zju:107420142 425.631