Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01323 ATGATCAAGGAAGAAGTTGATCTTGTGCTTCCACTCTTTGAGGTAGATGAGACAAGGAGGATTGACTGGAAATCTCTAACAAATTGGGTGTTAAAGGTATATAAAGAGAGGAAAACACTAGCACATGCCTTGAAAGACACTAAAACTGCTGTGAAGCAATTGAACAATTTGGTAACAGTGCTTCTGATCATAGTAACAGCTATTATTTGGCTTCTGTTGATGGAAATTGCTACAACCAAAGTACTCGTCTTCCTCCTATCTCAACTTGCAGTGGCTGTTTTCATGTTTGGAAACACTTGCAAGACTATCTTTGAAGCTCTAGTCTTTGTGTTTGTTATGCATCCATTTGATGTTGGGGACCGTTGCGCTGTCGAGGGCGTCCCGTTGATGGTTGAAGAAATGAATATCTTGACAACAGTCTTCTTGAAACTCAACAATGAGAAAGTGTATTATCCCAACTCAGTTTTGGCAACAAAGTCGATTACGAATTACTACAGAAGTCCTGACATGAGCGACACGGTAGAATTCTCGATCGGTTTCGCAACGCCATTGGAGAGGATCGGGCTCATGAAAGACAGAATAAGGAGGTGGGTGAAAGTCGAACAAATAACAAAAACGCTTCCATTTTTGGAATGCAATCCTTACCTTACTGATGGTTTCTGCAGATATTTGGAGAAGAATCCACAACACTGGCATCCAAATCATAGTGTGGTGGTGAAGGAGATCGAAGACGTGAACAAGATAAAGTTTGCTCTTTATTCGAACCACACGATGAATTTCCAGGACTGGACGGAGAAGAATCGTCGAAGAACCGAGCTGGTGATGGAGTTGAAGAGAATTTTCGAAGAACTGAAGATCAACTACAATCTTCTACCTCAAACAGTTCATCTCTTCCCAGCTGAGGGGCACTGA 912 41.78 MIKEEVDLVLPLFEVDETRRIDWKSLTNWVLKVYKERKTLAHALKDTKTAVKQLNNLVTVLLIIVTAIIWLLLMEIATTKVLVFLLSQLAVAVFMFGNTCKTIFEALVFVFVMHPFDVGDRCAVEGVPLMVEEMNILTTVFLKLNNEKVYYPNSVLATKSITNYYRSPDMSDTVEFSIGFATPLERIGLMKDRIRRWVKVEQITKTLPFLECNPYLTDGFCRYLEKNPQHWHPNHSVVVKEIEDVNKIKFALYSNHTMNFQDWTEKNRRRTELVMELKRIFEELKINYNLLPQTVHLFPAEGH 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11825413 11827214 - Carg10714-RA Car01g01323 142187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01323 303 Pfam Mechanosensitive ion channel 55 287 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01323 Car-Chr1:11825413 Car08g00894 Car-Chr8:5992536 7.79E-64 dispersed
Car01g01323 Car-Chr1:11825413 Car10g00675 Car-Chr10:3483489 5.83E-116 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01323 K22048 - csv:101217197 458.373