Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01330 ATGAGCCTGAATGCAGCGGAGGATGAATCGACTTCAGAAATTCATATTCCAGCAGAGATTGATTGGGATATGTTAGACAAATCCAAATTCTTTTTTCTGGGTGCTGCTTTATTTTCAGGTGTATCAACTGCTCTTTACCCTATTGTTGTTTTGAAAACTCGGCTTCAGGTTTCTGCTACTAAGCTATCAAGCTTTAACATGTCGTATTCTATCATGCGCCATGAAGGTTTAAGAGGGTTTTACAGAGGGTTTGGAACCTCTTTAATGGGAACTATCCCAGCTCGAGCCTTTTACATGACAGCTCTTGAAGTTACCAAGAGTGGCGTTGGTAGTGCAACGGTTAGATTAGGCTTTTCAGACACGACAGCCATGGCTATAGCTAATGGAGCTGCTGGGTTGAGCTCGGCTATGGCTGCTCAATTGGTCTGGACTCCTATAGATGTTGTGAGCCAAAGACTAATGGTTCAGGGCTGCAATAACAGTGCTAATAACCTTAATTCTTGCGTCTATAAGAATGGTATTGACGCTTTTCGAAAGATCGTTTATGCGGATGGTTTTCGAGGATTATATAGAGGATTTGGGATATCAATCTTGACATATGCTCCATCAAATGCTGTTTGGTGGGCTTCTTACTCTGTCGCTCACAGGCTTATTTGGAGTGGTTTAGGCTACTACAATAGTAACAAGGATGAGAGTTTTAATACTGCTGGGTATGCCTTTAAACCAGATTCCAAGGCAACAGTGGCTATTCAGGGCTTGAGTGCAGCCTTGGCCAGTGGGGTTTCTGCTATCATAACAATGCCTCTAGATACCATCAAGACTAGATTGCAAGTTTTGGATGGAGAAGAAAATGGTCAAAGACGACCCTTAACGGCATTGCAGACTGTAAGAAACTTGATGAAGGAAGGTGGGCTGAATGCCTGTTACAGAGGGCTCGGGCCTCGGTGGGCGTCGATGGCTATGTCGGCCACCACCATGATCACGACCTATGAGTTTCTCAAACGGCTATCTGCTAAGAACCAAGATCGCTTGAGCTGA 1038 44.32 MSLNAAEDESTSEIHIPAEIDWDMLDKSKFFFLGAALFSGVSTALYPIVVLKTRLQVSATKLSSFNMSYSIMRHEGLRGFYRGFGTSLMGTIPARAFYMTALEVTKSGVGSATVRLGFSDTTAMAIANGAAGLSSAMAAQLVWTPIDVVSQRLMVQGCNNSANNLNSCVYKNGIDAFRKIVYADGFRGLYRGFGISILTYAPSNAVWWASYSVAHRLIWSGLGYYNSNKDESFNTAGYAFKPDSKATVAIQGLSAALASGVSAIITMPLDTIKTRLQVLDGEENGQRRPLTALQTVRNLMKEGGLNACYRGLGPRWASMAMSATTMITTYEFLKRLSAKNQDRLS 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11852113 11853150 - Carg10707-RA Car01g01330 142194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01330 345 ProSiteProfiles Solute carrier (Solcar) repeat profile. 246 336 IPR018108 -
Car01g01330 345 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 217 IPR018108 -
Car01g01330 345 Pfam Mitochondrial carrier protein 247 340 IPR018108 -
Car01g01330 345 Pfam Mitochondrial carrier protein 36 107 IPR018108 -
Car01g01330 345 Pfam Mitochondrial carrier protein 126 218 IPR018108 -
Car01g01330 345 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01330 Car09g00305 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01330 Car-Chr1:11852113 Car08g00667 Car-Chr8:4286528 2.43E-159 dispersed
Car01g01330 Car-Chr1:11852113 Car17g00662 Car-Chr17:6132845 1.58E-162 wgd
Car01g01330 Car-Chr1:11852113 Car09g00305 Car-Chr9:1693339 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01330 K15121 - csv:101213436 600.897