Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01366 ATGACCGGAATTTCCTCGCCGGTCTTCATCGGCGCCGGGGTTGACTTCTCTTCTGCCATTCACCGTTACCTTCCCTCTGCGGCTGATTCTGACGAAGTGGACGCGGCGGACTCGCCGGTTGATGGTTTTTCCTGTGACGATTTTCGGATGTTTGAGTTCAAAATTCGGAGATGCCCACGTGGTCGGTCGCATGATTGGACGGAGTGTCCGTATGCCCATCCCGGCGAGAAGGCTCGCCGGAGAGATCCGAGGAAGTATCAATATTCCGGCACGGCTTGTCCGGAATTTCGGAAAGGGAATTGCAAGAAAGGGGATTCTTGCGAACTTGCTCACGGGATTTTCGAGTGTTGGCTCCATCCCGCTCGGTATCGGACTCAGCCCTGTAAGGATGGATTGGCCTGCCGCCGCCGTGTCTGTTTTTTCGCCCACACAACAGGGCAGCTTCGGGTTCTGTCACAGCAGAGCCCGAGAACTCCGGTTTCGGACGACTCACTCGCATTCGATTCCTATTTCGCCAAGGGGTCATTTCTGACCTCACCCACTTCAATTCTATCAACGCCGCCGGTCTCCTCGCCGTCCGATTCGCCTCCTATGTCGCCGAATTGCCCCCAACTCGGCGGCGGGTCGTTTAATTCGATGAATGGTCTCGTTTTGTCCATGCGTAACCTTCAAATGGGGGAAATGAAAGCAACCCCTCAATGGGGGGTTCAATTGGGACAAAATTTGCATTCTCCCTCCGGCTCTGGTTTCTACAGCTCACCGTCGACTCCGACCACCGGGAATTACGAATTATGGGGGAAGAATTATGAAGAAGAACCTCCAATGGAAAGAGTGGAATCTGGGAGAGACCTGAGAGCTAAAATTTATGCGAAACTCAGCAAAGACAACTCAGTGGCGCAGCCATTGACACCCGATGTCGACTGGGTCTCGGAGCTACTGATGTGGACCGGGGCTGCTGAAGTCAGTACATAA 972 53.91 MTGISSPVFIGAGVDFSSAIHRYLPSAADSDEVDAADSPVDGFSCDDFRMFEFKIRRCPRGRSHDWTECPYAHPGEKARRRDPRKYQYSGTACPEFRKGNCKKGDSCELAHGIFECWLHPARYRTQPCKDGLACRRRVCFFAHTTGQLRVLSQQSPRTPVSDDSLAFDSYFAKGSFLTSPTSILSTPPVSSPSDSPPMSPNCPQLGGGSFNSMNGLVLSMRNLQMGEMKATPQWGVQLGQNLHSPSGSGFYSSPSTPTTGNYELWGKNYEEEPPMERVESGRDLRAKIYAKLSKDNSVAQPLTPDVDWVSELLMWTGAAEVST 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12022257 12023387 - Carg10671-RA Car01g01366 142230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01366 323 MobiDBLite consensus disorder prediction 182 205 - -
Car01g01366 323 ProSiteProfiles Zinc finger C3H1-type profile. 87 114 IPR000571 GO:0046872
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01366 Car09g00274 CCT
Car01g01366 Car09g00274 ECH
Car01g01366 Car05g00097 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01366 Car-Chr1:12022257 Car12g01256 Car-Chr12:11829776 1.01E-99 dispersed
Car01g01366 Car-Chr1:12022257 Car10g00622 Car-Chr10:3158837 2.79E-103 wgd
Car01g01366 Car-Chr1:12022257 Car11g00553 Car-Chr11:2977852 1.49E-98 wgd
Car01g01366 Car-Chr1:12022257 Car12g00569 Car-Chr12:3813502 7.30E-98 wgd
Car01g01366 Car-Chr1:12022257 Car05g00097 Car-Chr5:498875 1.04E-79 wgd
Car01g01366 Car-Chr1:12022257 Car09g00274 Car-Chr9:1495919 1.16E-174 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2888 None None None None Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01366 - - csv:101205433 495.352