Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01374 ATGGCTCCCTCGTTTGACTGGTGGGGAAAAGACACTCATAGAGGAACTCCTGTTGTTGTGAAGATGGAGAATCCGAATTGGTCGATGGTGGAGCTGGAAGGACCGTCGGAGGATGATTTTCTCATCGCCGGCGACTCGCCGGCGAGTCGGACTAGAGAGAAAGCGCGAGGCAAAAACGCTAAGCAACTAACGTGGGTTCTCCTCCTTAAGGCTCATAAGGCTGCTGGTTGTTTAACTTCCATTGGCTCTGCAATGGTGGACCTAGCCGCTGCCGTTAGACGCCGTGTTGCTTCTGGTCGGACTGACGCCGATGACGCCGACAATGACGTCTCTGTTGGAGGCAGAGTGAAAGAGAACCCCACTGTGAAAACGAGATTCTATTCTTGTATCAAAGTGTTTCTATGGCTGTCGGTGCTTTTGTTGGGTTTTGAGATTGCGGCGTTCTTCAAAGGCTGGCATTTTGATACTCCAAAGCTTCATTTGGATTATCTCTGGGCATCGCAGTGGGGCTTTAAAGGAGTTTTTGATTGGATTTACGCTCAATGGGTATTGATTCGAGTGGGTTATTTAGCTCCTCCTCTTCAGTTCTTAGCCAATGCCTGTATCATATTGTTCATCATTCAGAGCTTGGATCGTTTAATCTTATGTCTGGGTTGTTTCTGGATCCGATTCAAGAAAATCCAACCAGTTCTTAAACCTGGAGATTTAGACCTTGAATCCGCCGAAAAGGGCTACTTCCCAATGGTTCTTGTGCAGATCCCCATGTGCAATGAAAAAGAGGTTTATCAGCAATCAATCGCTGCTATCTGCAACTTGGACTGGCCTAGAACCAAGCTGCTAATTCAAGTTCTTGATGACTCTGATGATCCAACAACCCAATTGCTGATACAAGAAGAGGTTCATAAATGGCAGCAAGAGGGCGCCAACATTGTTTATCGTCATAGAATCATTAGAGATGGTTACAAGGCTGGCAACCTCAAATCCGCCATGAATTGTAGCTACGTTAAAGACTACGAATTCGTCGCCATCTTCGACGCCGATTTTCAACCCACACCTGATTTCCTTAAAAGAACTGTTCCTCATTTCAAGGATAATGAGGAGCTGGGGCTGGTTCAAGCAAGATGGTCGTTCGTGAACAAGGATGAGAATTTACTGACCAGGCTGCAGAACGTTAATTTAGCTTTCCATTTTGAAGTAGAGCAGCAAGTTAACAGTGTGTTCCTCAACTTCTTTGGATTCAATGGCACTGCTGGTGTGTGGAGGATCAAAGCCCTCGAGGACGCCGGTGGGTGGTTGGAAAGGACCACGGTCGAGGACATGGATATCGCGGTCCGTGCTCATCTTCATGGATGGAAATTCATATTCCTAAACGACGTCGAGTGCCAATGTGAGCTACCAGAATCTTATGAAGCTTATAGAAAACAACAACACAGATGGCATTCTGGTCCAATGCAATTGTTTCGTCTTTGTCTGCCTGCTATTATTCGATCAAAGATTAGTATATGGAAGAAGTTCAACTTGATCTTCCTCTTCTTTTTGCTCAGAAAATTGATATTGCCCTTCTATTCCTTCACACTTTTCTGCATAATTCTCCCAATGACAATGTTCGTTCCTGAAGCCGAGCTACCCGCGTGGGTCGTTTGCTATATCCCAGCCACGATGTCGTTTCTAAACATCCTACCTGCCCCAAAATCCTTCCCTTTCATTGTCCCTTACCTCCTTTTTGAAAACACCATGTCAGTTACCAAGTTCAATGCCATGATCTCAGGGCTCTTCCAGCTTGGTAGCGCATACGAATGGGTTGTCACGAAGAAATCGGGTCGGTCCTCGGAAGGTGATCTTTTGTCGTTGGTAGAGAGAGAGCAAAAGCATCAAAGAGGGGCGTCGGCGCCCGACTTAGAAGAGATGAAGGAAGAGCTTGAGAAGCAGGAAAAGAAAGCTTCTTTGCGGAAGAAGCATAACCGAATATATACAAAAGAGCTGGCATTGGCTTTCCTTCTCTTAACTGCATCAGCACGGAGCCTTCTGTCTGCTCAAGGGATCCATTTCTACTTCTTGCTATTCCAGGGGATCTCGTTCCTGCTTGTCGGGTTGGATTTGATCGGCGAACAAATAGGTTGA 2121 46.2 MAPSFDWWGKDTHRGTPVVVKMENPNWSMVELEGPSEDDFLIAGDSPASRTREKARGKNAKQLTWVLLLKAHKAAGCLTSIGSAMVDLAAAVRRRVASGRTDADDADNDVSVGGRVKENPTVKTRFYSCIKVFLWLSVLLLGFEIAAFFKGWHFDTPKLHLDYLWASQWGFKGVFDWIYAQWVLIRVGYLAPPLQFLANACIILFIIQSLDRLILCLGCFWIRFKKIQPVLKPGDLDLESAEKGYFPMVLVQIPMCNEKEVYQQSIAAICNLDWPRTKLLIQVLDDSDDPTTQLLIQEEVHKWQQEGANIVYRHRIIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQNVNLAFHFEVEQQVNSVFLNFFGFNGTAGVWRIKALEDAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAIIRSKISIWKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLLSLVEREQKHQRGASAPDLEEMKEELEKQEKKASLRKKHNRIYTKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQIG 706
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12066696 12069176 + Carg10663-RA Car01g01374 142238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01374 706 Coils Coil 630 653 - -
Car01g01374 706 Pfam Glycosyl transferase family group 2 341 536 IPR001173 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01374 Car09g00263 CCT
Car01g01374 Car12g00556 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01374 Car-Chr1:12066696 Car09g00462 Car-Chr9:2571021 0 dispersed
Car01g01374 Car-Chr1:12066696 Car12g00556 Car-Chr12:3712275 0 wgd
Car01g01374 Car-Chr1:12066696 Car09g00263 Car-Chr9:1438177 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01374 - - csv:101204215 1330.85