Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01375 ATGGGTGATCTCGAAAATGACGAAATGGGTTTTCGAAATTCGAGTGATGGGTTACTGAATTGTCCATCTTCGGATAGAACTTCAGTAACAATGGCGATGGGTTCGTTTTATGGGTCTGGTTGGGATCCACTGGTTTCATTAGGTCAAAGTGAGAGCTTTGGAGCAGCTTCAATGGCTTCCTCACATCGAGATCTTTCAAATTCCTTTCCTATTGTTTTGGAGAATCATCATCATGGAGGAGGAAGTGGCACATCACAGACTGTTCAATATCCGACAGATTTAGAGATGGGTACGAAGTTGCCATGTTTTGGGAGTGGGAATTATTCCGACATGTTCGGTTCTTTTGGTCTTGCTGATCAGATTCTTGGAGGGTGTTCTTCAAGTTACAGAAATGGAGGAACTGCCAACACTGCTCAAACATCACAACAAACTTTACCACCACCATCTGGTGAAGAAGCTGCATTAGGTTCGCCAAATGGTAAAATCAGAAAACGAGCCCTTGATTCCGCCTTCCCATTTAGTTCAAATACGAAATCTGAAGGGAAAGTGAAAAAAGATGTTTCTGGGGAAAGTTCGAGTACACAAGAAGAGAAAAATCCAGAAATGGAACAGAATTTACGAACTGGAAAACAAGCTAAAGAGAAGTCCAGTAACAGTGGAGAAGCTCCCAAAGAGAATTACATTCATGTGCGAGCTAGAAGAGGGCAAGCCACAAACAGCCATAGCCTTGCTGAGAGGGTGAGGAGGGAGAAGATTAGTGAACGGATGAGATTGCTTCAAGAACTTGTTCCTGGATGCAATAAGATTACTGGAAAAGCTGTAATGCTTGATGAAATTATAAACTATGTTCAATCACTGCAACAACAGGTTGAGTTTTTGTCGATGAAACTTGCTACTGTCAACCCCGACATGAACATCGATCTCGAGCGGATTTTATCCAAAGATATTTTCCAGGTACGAGGCAGCAATGGAAGTGTTCTAGGATTTGATCATCCTGGGATGAGCGCAGCTCCTCCGGTCGTCCCCGCTCACCGGATGTTTCAGTTTCAGGGGATGATGTCGAATATGGCATCCACATCCACATCCACGCAGTTTCCTTCTTTACCTCAGACGATGTTGGAAAGTGATATCCAAACTCTTCTTCAAATGGGGTTCGATTCCGGTTCGGCCATTGACACTTTGGGACCAAATGGTAGGCTTCATAATCTAATAGCTTTGCATTCTGAACTTCCAGATGGTAATTGA 1245 43.37 MGDLENDEMGFRNSSDGLLNCPSSDRTSVTMAMGSFYGSGWDPLVSLGQSESFGAASMASSHRDLSNSFPIVLENHHHGGGSGTSQTVQYPTDLEMGTKLPCFGSGNYSDMFGSFGLADQILGGCSSSYRNGGTANTAQTSQQTLPPPSGEEAALGSPNGKIRKRALDSAFPFSSNTKSEGKVKKDVSGESSSTQEEKNPEMEQNLRTGKQAKEKSSNSGEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPDMNIDLERILSKDIFQVRGSNGSVLGFDHPGMSAAPPVVPAHRMFQFQGMMSNMASTSTSTQFPSLPQTMLESDIQTLLQMGFDSGSAIDTLGPNGRLHNLIALHSELPDGN 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12071042 12073172 - Carg10662-RA Car01g01375 142239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01375 414 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 236 286 IPR011598 GO:0046983
Car01g01375 414 MobiDBLite consensus disorder prediction 133 158 - -
Car01g01375 414 MobiDBLite consensus disorder prediction 170 226 - -
Car01g01375 414 MobiDBLite consensus disorder prediction 133 148 - -
Car01g01375 414 MobiDBLite consensus disorder prediction 179 210 - -
Car01g01375 414 Pfam Helix-loop-helix DNA-binding domain 239 287 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01375 Car09g00262 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01375 Car-Chr1:12071042 Car04g01621 Car-Chr4:9365225 8.83E-58 dispersed
Car01g01375 Car-Chr1:12071042 Car09g00262 Car-Chr9:1434733 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2891 PF00010 HLH 4.30E-06 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01375 - - cpep:111788194 804.283