Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01410 ATGGGTACGGTATCCCATCGCACCACGGGAACTTTGAACATAATGCATTCAACCATGGAAGAGACGTTGTTGTTCTCTAATTTTGAGGTCACATTGTTGGTCCTAATTTTAGGTGTCCTTCTGATTTTCAAATTCAGAAAAGCGGAGAACAAAAATCTCCCACCCGGCCCACCTTCAATTCCGGTAATCGGCCACCTCCATCTTCTAAAAGAGCCATTCCACCAAATGCTGCAAGATCTGTCGCAAAAGTACGGTCCAATCCTGTCGCTGTCACTCGGTTTCCGCCCCGTGGTGGTTGTTTCCTCCCCGGCCGCCGCCCAGGAGTGCTTTTCGAAAAACGACATCATATTTGCCAGCCGTCCTCGTATGATTTCCGGGAAGATTCTCAATTATGACTACACTGCCGTTGGTGCTACTGCATACGGACAGCACTGGCGCATCATGCGCCGCATAGCTACCACTGAGCTACTCTCCACGTACCGTCTCAACGCATTAATTAACATCCGACAGCAGGAGGTTAAATTATGGCTCAAAAGTTTATACCGAATTTCGGGCAAAAATAATGTCCGAGTGGAGATAAGGTCCAAATTGACGGAGCTGTCTTTCAATATTGCGTTGATGTTGATGGTTGGGAAGCGTTACTTTGGAGATGAAGCAGTGGATGATAGTGAGGAGGCGAGGGAGTTGAAGAACACAATGAAGCAAGTTCCTCTACTGAGCGGAGCATCGTATCCAGCTGATTTCTTGTCGGTTTTGAAATTGGTCGATTATCAAGGATTCAGGAAGAGGCTGGCTAAGGTGAGGGTGGACGGCGATGCTTTTGCACAAAGTTTGATTGATGAACGTCGGAACAAGAAAGCCGATGACAATGAACGAAAGACCATGATTGATAGTCTGCTGTCCATGCAACAAATGGAACCTGAATATTACAAGGACGATATCATCAAGGGCCAATTCTTGACTCTTCTGGCTGCGGGAACTGACACAACAGCGGGAACACTAGAGTGGGCGTTGTCGCTACTCCTCAACCATCCGACCGCGATGAAGAAGGCGTGGACTGAGATAAACGAGCATGTTGGGGACGAACGGCTGGTAGAAGAGATGGATCTTAACCAGCTACACTATCTTCAAGGCATAATCAACGAGACCTATCGCCTATTTCCAGCGCTTCCAATATTGGTTCCACGAGAATCATCCGAAGACTGCACAATTGGAGGGTTTGACGTTCCGAAAGGAACGATGTTAGTGGTGAATGCATGGGCCATCCATCGAGACCCAAAAGTGTGGGAAGATCCCAATAGCTTCCGACCAGAGAGGTTCAAAGAGGGCGAGAGTGTGGAAGTAAGTAAATTGTTGCCATTTGGGATGGGGAGAAGGGCGTGTCCAGGGGCTGGCCTTGCGCACAGAGTGGTGGGGCTGGCGCTGGCCACTCTGATTCAGTGCTTTGAGTGGGAGAGACTCGACAACAAGGAAGTAGACTTGACTCCTGGAATTGGACTCACCATGCCCAAAGCCAGCCCTTTGGTAGCTATGTTCAAACCTCGTGCTCCCATCATTCATTTACTATCACAGCTTTGA 1578 48.61 MGTVSHRTTGTLNIMHSTMEETLLFSNFEVTLLVLILGVLLIFKFRKAENKNLPPGPPSIPVIGHLHLLKEPFHQMLQDLSQKYGPILSLSLGFRPVVVVSSPAAAQECFSKNDIIFASRPRMISGKILNYDYTAVGATAYGQHWRIMRRIATTELLSTYRLNALINIRQQEVKLWLKSLYRISGKNNVRVEIRSKLTELSFNIALMLMVGKRYFGDEAVDDSEEARELKNTMKQVPLLSGASYPADFLSVLKLVDYQGFRKRLAKVRVDGDAFAQSLIDERRNKKADDNERKTMIDSLLSMQQMEPEYYKDDIIKGQFLTLLAAGTDTTAGTLEWALSLLLNHPTAMKKAWTEINEHVGDERLVEEMDLNQLHYLQGIINETYRLFPALPILVPRESSEDCTIGGFDVPKGTMLVVNAWAIHRDPKVWEDPNSFRPERFKEGESVEVSKLLPFGMGRRACPGAGLAHRVVGLALATLIQCFEWERLDNKEVDLTPGIGLTMPKASPLVAMFKPRAPIIHLLSQL 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12236747 12239450 + Carg10627-RA Car01g01410 142274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01410 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Car01g01410 525 Pfam Cytochrome P450 54 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01410 Car-Chr1:12236747 Car09g00223 Car-Chr9:1265768 0 dispersed
Car07g00392 Car-Chr7:1978354 Car01g01410 Car-Chr1:12236747 4.03E-74 transposed
Car09g00290 Car-Chr9:1562286 Car01g01410 Car-Chr1:12236747 8.09E-34 transposed
Car14g00240 Car-Chr14:1123981 Car01g01410 Car-Chr1:12236747 1.34E-27 transposed
Car01g01410 Car-Chr1:12236747 Car09g00169 Car-Chr9:841542 1.85E-37 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01410 - K13260 csv:101207242 772.696