Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01434 ATGGGTGTAATTTTTGCATCTCTTTTGCTATTTTTTCTCATTGTATTGTCGTATATTTATTTAAACAGAAACAAGAGGGCAGGCATTAGAGATGGAGCTAAGCTCCCTCCTGGTTCTTTAGGGTGGCCTTATATTGGAGAAACCCTTCAGCTCTATTCTCAAGACCCTGATTTGTTCTTCGCCGCCAAACAGAAAAGGTATGGGGAGATTTTTAAGACGCATATACTTGGATGTCCTTGCGTGATGTTGGCTAGCCCCGAGGCGGCGAGGTTCGTGCTGGTGACACAGGCTCATTTGTTTAAGCCTACTTACCCCAAAAGCAAAGAGCGTTTGATTGGCCCATCTGCCTTGTTTTATCACCAAGGTGACTATCATTGCCGCCTTAGGAAGCTGGTTCAGAACTCTCTTTCTCTGGACGTCATCCGGAGCCTGGTCCCCGATATCGACTCCGTAACTACCTCCGCTCTCCACTCCTGGACCGGTGCCCACCTTATCAACACTTTCCATGAAATGAAAAAGATATCGTTTGAAGTTGGGATATTGGCCATTTTTGGGCATTTAGAAGCTGCTTACAAAGAGGACCTGAAAAAAAACTACAGCATTTTGGACGCAGGCTACAATTCTTTCCCGACCAACATTCCTGGAACTCCATACAAAAAGGCACTCTCAGCTAGAAAGCGGCTAAGTAAAATCTTAGGTGATATAATCCACGAAAGGAGGGAGAAGAAGGTGGGGAAGAAGGATCTTTTGGGGTGCTTTCTGAACTCCATAGATGAAGAAGGTGAAGCTATAAGCGATGCCCAAATAGAAGATAACATAATTGGGGTGCTTTTTGCGGCTCAAGACACCACAGCCAGTGTCATGACTTGGGTCGTCAAGTACCTTTATGACCAACCCAAGCTTCTTCAAACGCTAAAAAAAGAGCAACAGGAAATTTTAGAGTTCAATTACGAGAAAAATCAACCGTTGAACTGGGTTCAGACAAGAAACATGCCTATGAGTTATAAGGTAGTATTGGAGAGCTTAAGGATGGCGAGCATTATATCATTCACATTCAGGGAGGCTGTAGCTGACGTGGAATACAAAGGGTATTTGATTCCAAAAGGTTGGAAAGTGATGCCTTTGTTTCGAAACATCCATCACAGTCCCGAATATTTTGCCGATCCTCACAAATTCGACCCTTCTAGATTTGAGGTTGCACCGAAACCCAATACGTTCATGCCATTTGGCAGTGGAGTTCATACCTGCCCAGGGAATGAGCTTGCCAAGCTGGAGATCTTGATCCTCATTCATCATCTAGTCACTAAATTCAGGTGGGAATTAGTTGGTTCGCAAAACGGGGTTCAGCATAGTCCATTTCCCGTTCCCTCTCAAGGCCTTCCAGCACGATTTTGGAATATAGCCCACCACAACACCGTACATACCAAAATGGACCCCAACTAA 1443 44.63 MGVIFASLLLFFLIVLSYIYLNRNKRAGIRDGAKLPPGSLGWPYIGETLQLYSQDPDLFFAAKQKRYGEIFKTHILGCPCVMLASPEAARFVLVTQAHLFKPTYPKSKERLIGPSALFYHQGDYHCRLRKLVQNSLSLDVIRSLVPDIDSVTTSALHSWTGAHLINTFHEMKKISFEVGILAIFGHLEAAYKEDLKKNYSILDAGYNSFPTNIPGTPYKKALSARKRLSKILGDIIHERREKKVGKKDLLGCFLNSIDEEGEAISDAQIEDNIIGVLFAAQDTTASVMTWVVKYLYDQPKLLQTLKKEQQEILEFNYEKNQPLNWVQTRNMPMSYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVMPLFRNIHHSPEYFADPHKFDPSRFEVAPKPNTFMPFGSGVHTCPGNELAKLEILILIHHLVTKFRWELVGSQNGVQHSPFPVPSQGLPARFWNIAHHNTVHTKMDPN 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12370923 12373137 + Carg10603-RA Car01g01434 142298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01434 480 Pfam Cytochrome P450 36 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car01g01434 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01434 Car05g00156 CCT
Car01g01434 Car05g00156 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01434 Car-Chr1:12370923 Car16g00453 Car-Chr16:2884958 0 dispersed
Car06g01452 Car-Chr6:10339454 Car01g01434 Car-Chr1:12370923 2.60E-30 dispersed
Car12g00427 Car-Chr12:2734101 Car01g01434 Car-Chr1:12370923 5.44E-67 dispersed
Car14g01227 Car-Chr14:10654586 Car01g01434 Car-Chr1:12370923 1.18E-30 dispersed
Car19g00326 Car-Chr19:5126420 Car01g01434 Car-Chr1:12370923 9.33E-74 dispersed
Car10g00779 Car-Chr10:4221806 Car01g01434 Car-Chr1:12370923 4.94E-80 transposed
Car19g00841 Car-Chr19:8882770 Car01g01434 Car-Chr1:12370923 1.81E-77 transposed
Car01g01434 Car-Chr1:12370923 Car11g01089 Car-Chr11:8536333 0 wgd
Car01g01434 Car-Chr1:12370923 Car19g00458 Car-Chr19:6287688 0 wgd
Car01g01434 Car-Chr1:12370923 Car05g00156 Car-Chr5:812842 3.22E-06 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01434 K09843 - csv:101213916 821.231