Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01442 ATGTGCACAAGGGGTGAACATCATACGGTCTCGCTCTCCGTGCTCCTGAAGCGTGAATTGGCGATTGAGAAGATTGAGAGACCGGAAATCGTACATGGTCAAGCGTGTCAGAGTAAGAAAGGGGAGGATTTTACGTTGATAAAGACGGAATGCGAGAGAGTGGTTGGAGATGGAGTCTCTACGTATTCGCTTTTTGATGGACATAATGGATCTGCTGCTGCTATTTATGCGAAGGAAAATCTGTTGAACAATGTTTTAGCTGCTATTCCACCAGATCTCAACAGAGATGAATGGATTGCAGCATTACCAAGGGCCTTGGTCGCAGGTTTTGTGAAGACGGACAAAGATTTTCAAGAGAAAGCACGAACATCAGGAACCACTGTCACCTTCATGATCATTGAGGGATGGGTTATCACTGTTGCTTCTGTTGGAGATTCCCGTTGCACTTTAGAATCAGCTGAAGGTGTCATCTACTACTTATCAGCAGATCATAGACTAGAATGCAATGAAGAAGAGAGAGAACGTATAATTGCTAGTGGAGGTGAGGTAGGCCGACTGAATACTGGTGGTGGTGCAGAGATCGGTCCATTGAGATGCTGGCCCGGTGGCTTGTGTCTATCACGATCCATTGGTGATATGGATGTTGGTGAGTTTATAGTGCCTGTTCCCTATGTGAAGCAAGTTAAGCTATCTTCTACTGGTGGTAGGGTTATCATATCAAGTGATGGTGTTTGGGATGAATTATCCGCAGAAACTGCCTATGATTGTAGTCGGGGGATGCCAGCAGAAACTGCTGCTGCACAGATTGTGAAGGAAGCAGTACATTCAAAGGGACTTCGAGATGATACTACGTGCATTGTGATTGACATATATCCAAGGGAGAAATCATCCACTGTTTTGCAGCCACTAAAGAAGCAGGGAAAAGGAATGTTTAAGTCAATGTTCCGCAAAAGATCTTCTGAATCATCTTCTCATTTGGGGAAGGAAAATAATGAGTTGGATGTCGTTGAAGAATTATTTGAGGAAGGATCGGCAATGCTCTCAGAAAGGTTAGATGCCAAGTATCCTATCTGCAACATGTTTAAGCTGTTTGTATGTGCAGTATGCCAAGTTGAGATCCAACCTCGGGAGGGTATTTCCATATATGCTGACTCATCTAACAGAGGAAAATTGCGTGCTTGGGATGGTCCTTTTCTATGCTTAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAGAGACCATCTGGAGGTCTGTGGATCCTGTGTTTGTGTGTGATTCTGAGTATAGACACAGCAGTGGAAGTGACTAGCCTACTCTTGAGTTACACTTCTTTGTGG 1341 44.3 MCTRGEHHTVSLSVLLKRELAIEKIERPEIVHGQACQSKKGEDFTLIKTECERVVGDGVSTYSLFDGHNGSAAAIYAKENLLNNVLAAIPPDLNRDEWIAALPRALVAGFVKTDKDFQEKARTSGTTVTFMIIEGWVITVASVGDSRCTLESAEGVIYYLSADHRLECNEEERERIIASGGEVGRLNTGGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKLSSTGGRVIISSDGVWDELSAETAYDCSRGMPAETAAAQIVKEAVHSKGLRDDTTCIVIDIYPREKSSTVLQPLKKQGKGMFKSMFRKRSSESSSHLGKENNELDVVEELFEEGSAMLSERLDAKYPICNMFKLFVCAVCQVEIQPREGISIYADSSNRGKLRAWDGPFLCLSCQEKKEAMEGKRPSGGLWILCLCVILSIDTAVEVTSLLLSYTSLW 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12406566 12410067 - Carg10594-RA Car01g01442 142306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01442 447 Pfam Protein phosphatase 2C 59 274 IPR001932 -
Car01g01442 447 ProSiteProfiles PPM-type phosphatase domain profile. 31 290 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01442 Car09g00187 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01442 Car-Chr1:12406566 Car18g00925 Car-Chr18:9998470 1.84E-149 dispersed
Car01g01442 Car-Chr1:12406566 Car09g00187 Car-Chr9:943952 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01442 - - bhj:120085570 767.303