Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01460 ATGAAAGGCTCGGGCTGCTGTTTGTTCATTTCTCTTCTTCTTCTCCAATCTTTTTCGTTTTTCGCTTCGGCTCTTTCCGATGCCGAAGCGTCGTCCATTGCCCGCCGCCAGCTTCTAACCTTTCTCGAGACCGATGATTTGCCTGACGATTACGAGTCCACGGTTGTGGTGACTGAAACCTTTCCCAATTCCAGGCTCCGACGGGCTTTCATTGCCCTTCAAGCCTGGAAGAGGTCAATTTACTCCGACCCTTTAAACACCACCGCCAATTGGGTCGGCGCTGATGTCTGTTCCTACACCGGAGTTTTCTGTACCTCTGCTCTGGACGACCCCAATGTCCAAGTCGTGGCCGGAATTGACCTCAACCATGCCGACATTGCCGGTTACCTCCCCGTTGAGCTCGGTCTACTGTCGGACATCGCATTGTTTCACATCAACTCCAACCGATTCTGCGGCCTTATCCCGCCGAGCTTCGAGAGGATGATTCTCCTTCACGAGCTCGACGTTAGCAACAACAGATTTGTGGGCCCTTTTCCTGAAGTCGTTTTGAGGATTCCGAATTTGAAATTTCTGGACATTAGATTCAACGATTTCGAAGGGAAATTGCCTCCTGCCCTTTTCACCAAGGAGCTCGACGCCATTTTCCTCAATAACAACAGGTTCACCTCCCACATTCCTGAGAATTTCGGCGACTCGCCGGCGTCGGTGATCGTGATTGCCAATAACAACTTCACGGGGTGCATTCCGACAAGCATTGGGAAAATGGGGAACACGTTGAACGAGGTTTTAATGTTGAACAATGCGCTTGGTGGTTGCATCCCTGGTGAGCTTGCTCTGCTTGGAAATGCGACGGTTTTCGATGTTTCTTCGAATCAATTGAGTGGGAGCTTGCCGATGAGCTTAGGTGGGTTGAAGAAAGTGGAGATTATTGATGTCTCTTCCAATAGTTTGACCGGTGTGGTGCATGGAGGCGTGTGTAATTTGCCTAAATTGGCTGTGTTCACATTCGCTGATAATTTGTTTGATGGCGAAGACAATAGGTGTGTGCCTCAGAATAGACAGGATGTTTGGTTGGAGGATGCTGACAATTGTTTGCAAGGGAGGCCTAAGCAAAAACCGGCGGAGACTTGTAGTTCAGAGATCAGCAAGGCCGTGGATTGCAGTCGGGTTAAGTGCGCCGGAGGATCCACACCTCCTAAACAGCCAGAGGCACCAATTGATGATCCTCATCGTCAATCACATGTCCCAATGAACCACCCTCCTCCTCCACCTGTTGCCTCACCCCCACCACCACCACCACCGGTGCACTCTCCACCCCCGCCCGTTGCTTCACCCCCACCACCGCCCGTTTTCTCACCACCACCACCACCACCCGTAGCCTCACCACCACCACCACCACCCGTGCCTCACCACCCACCACCACACCCGTAG 1431 52.06 MKGSGCCLFISLLLLQSFSFFASALSDAEASSIARRQLLTFLETDDLPDDYESTVVVTETFPNSRLRRAFIALQAWKRSIYSDPLNTTANWVGADVCSYTGVFCTSALDDPNVQVVAGIDLNHADIAGYLPVELGLLSDIALFHINSNRFCGLIPPSFERMILLHELDVSNNRFVGPFPEVVLRIPNLKFLDIRFNDFEGKLPPALFTKELDAIFLNNNRFTSHIPENFGDSPASVIVIANNNFTGCIPTSIGKMGNTLNEVLMLNNALGGCIPGELALLGNATVFDVSSNQLSGSLPMSLGGLKKVEIIDVSSNSLTGVVHGGVCNLPKLAVFTFADNLFDGEDNRCVPQNRQDVWLEDADNCLQGRPKQKPAETCSSEISKAVDCSRVKCAGGSTPPKQPEAPIDDPHRQSHVPMNHPPPPPVASPPPPPPPVHSPPPPVASPPPPPVFSPPPPPPVASPPPPPPVPHHPPPHP 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12495604 12497034 - Carg10576-RA Car01g01460 142324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01460 476 MobiDBLite consensus disorder prediction 415 476 - -
Car01g01460 476 MobiDBLite consensus disorder prediction 390 476 - -
Car01g01460 476 Pfam Leucine rich repeat N-terminal domain 72 104 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01460 Car-Chr1:12495604 Car08g00780 Car-Chr8:5110909 1.62E-149 dispersed
Car14g01568 Car-Chr14:12812508 Car01g01460 Car-Chr1:12495604 5.87E-121 dispersed
Car01g01460 Car-Chr1:12495604 Car09g00168 Car-Chr9:835696 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01460 - - cmax:111480794 783.482