Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01471 ATGCGCTCCGCCCTCCTCCTCCTTCTCCTCCTCGCCGTCTGCGCCGCCTCCCATGCCGCAATATTCAGAGAAGCCCCCCAATTTTTTAATTCCCCGGACTGCCCTTCCCTGGCCGATGATCTGGAGAAACACAATGAGAAGGGACAACACCACTGCTTCAATCATGCCGTCCACGTGGCGATGACGTTGGACACCGCTTACATACGTGGCTCCATGGCCGCCGTCCTTTCCGTCCTTCAACACTCCTCCTGTCCTCAAAGCGTAATTTTCCACTTCGTCTATTCCGCATCCGCCAACGCGTCATCTCTTCACGCCACCGTCTCCCATTCATTCCCTTACCTTAAATTCCAACTCTACCCTTTCGACGACGAAGCGGCCTCGCGATTGATTTCCACGTCAATCCGATCCGCGTTGGACTGTCCGTTGAACTACGCGCGTAGCTACTTAGCCAACCTCCTTCCCACTTGCGTCGCTCGAGTCGTGTACCTTGACTCGGACCTGATCCTCGTCGACGACATTGCCAAACTCGCCGCCCATCCATTCGGCGGCGAGTCAGTCCTCGCCGCGCCGGAGTACTGCAACGCCAATTTCACCGCCTATTTTACGCCGTCGTTTTGGTCCAACCCGTCTTTGTCCTTAACGTTCGCGAACCGGAAGGCGTGTTACTTCAACACGGGTGTTATGGTGATCGATCTGGACCGGTGGAGGGCCGGGGACTACACGACCAAGATTGAGGAATGGATGGAATTGCATAAGAGACTGAGAATCTACGAATTGGGGTCGTTGCCTCCGTTTTTGTTGGTGTTCGGCGGGGGGATTTCTCCGGTGGATCACCGGTGGAACCAGCACGGGCTCGGTGGCGACAATATCAGAGGACTCTGCAGGGATTTGCACCCGGGTCCGGTCAGTTTGTTGCATTGGAGTGGCAAAGGAAAACCGTGGGCTCGATTGGACGCGAACCGGCCCTGCCCTTTGGACGCTCTTTGGGCTCCCTACGATTTGTTACAGACCCCATTTTCAATCGATTCTTGA 1032 55.81 MRSALLLLLLLAVCAASHAAIFREAPQFFNSPDCPSLADDLEKHNEKGQHHCFNHAVHVAMTLDTAYIRGSMAAVLSVLQHSSCPQSVIFHFVYSASANASSLHATVSHSFPYLKFQLYPFDDEAASRLISTSIRSALDCPLNYARSYLANLLPTCVARVVYLDSDLILVDDIAKLAAHPFGGESVLAAPEYCNANFTAYFTPSFWSNPSLSLTFANRKACYFNTGVMVIDLDRWRAGDYTTKIEEWMELHKRLRIYELGSLPPFLLVFGGGISPVDHRWNQHGLGGDNIRGLCRDLHPGPVSLLHWSGKGKPWARLDANRPCPLDALWAPYDLLQTPFSIDS 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12580917 12581948 - Carg17126-RA Car01g01471 142335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01471 343 Pfam Glycosyl transferase family 8 58 316 IPR002495 GO:0016757
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01471 Car09g00157 CCT
Car01g01471 Car05g00179 CCT
Car01g01471 Car09g00157 ECH
Car01g01471 Car05g00179 ECH
Car01g01471 Car12g00466 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01471 Car-Chr1:12580917 Car07g00738 Car-Chr7:3808565 0 dispersed
Car01g01471 Car-Chr1:12580917 Car12g00466 Car-Chr12:2941124 0 wgd
Car01g01471 Car-Chr1:12580917 Car03g00925 Car-Chr3:7268186 0 wgd
Car01g01471 Car-Chr1:12580917 Car05g00179 Car-Chr5:954364 0 wgd
Car01g01471 Car-Chr1:12580917 Car09g00157 Car-Chr9:747771 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01471 K20893 - csv:101211531 624.78