Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01557 ATGGCGCAAACGACGCCGAATCACACACAGACGGTCTCCGGTTGGGCAGCTCACGATTCGTCCGGCAAGATCACACCGTACACTTTCAAACGCAGAGAGAATGGTCCAGACGACGTGACGATAGAGATTTTGTACTGTGGAATATGCCATACCGATCTTCACTATGCCAAAAACGAGTGGGGCATCACCATGTATCCTGTAGTTCCCGGGCACGAGATGACAGGTGTGATTTCGAAGGTGGGAAGCAACGTGAAGAAGTTCAAAATAGGGGACAGAGTGGGAGTGGGATGTATAGCCGCTTCGTGTTTGAGCTGTGAGTTCTGCCAAGATTCACAAGAGAATTACTGTGAAAAATTGCAGTTTACATACAATGGAATCTTCTGGGATGGGAGCATAACTTATGGCGGATACTCCAAAATGTTTGTTTCAGATCAGAGGTACGTGGTGCACATCCCGGAGAGCCTGCCGATGGACGCTGCGGCGCCGTTGCTGTGCGCTGGGATTACAGTGTTCACGCCCATGAAAGACATGGATCTGATCCACTCACCGAGGAAGAAGGTGGGAGTGGTGGGTCTCGGTGGGCTTGGCCACATAGCTGTCAAATTTGGGAAGGCGTTTGGCCACCATGTGACTGTCATCAGCACCTCCGCTTCCAAGGAGAAAGAAGCTAAAGAACGCCTTGGCGCCGACGAGTTCATAGTCAGTAAAGATCCTCAACAGATGCAGAAGCACAAGAGGACGTTGGATTTTGTATTGGACACAGTGTCGGCACAGCATTGTATTGGACCAATCTTGGAACTGCTAAAAGTGAATGGGACACTATCCATTGTGGGGGCTCCAGACAAGCCCATTCAACTGCCCTCCTTCCCTTTAATCTTTGGAAAAAGGACGGTGAAAGGAAGCATTATAGGTGGAATACAAGAAACTCAGGAAATGATGGATTTGTGTGGGAAGTACAACATCACTAGTGATATTGAGGTGGTAAAGCCGGACGACATCAACCATGCTATGGAACGTCTCACTAAGAACGATGTTCGATATCGATTCGTCATTGACATTGCCCAAAATAATACTAAGTTGTAA 1083 48.29 MAQTTPNHTQTVSGWAAHDSSGKITPYTFKRRENGPDDVTIEILYCGICHTDLHYAKNEWGITMYPVVPGHEMTGVISKVGSNVKKFKIGDRVGVGCIAASCLSCEFCQDSQENYCEKLQFTYNGIFWDGSITYGGYSKMFVSDQRYVVHIPESLPMDAAAPLLCAGITVFTPMKDMDLIHSPRKKVGVVGLGGLGHIAVKFGKAFGHHVTVISTSASKEKEAKERLGADEFIVSKDPQQMQKHKRTLDFVLDTVSAQHCIGPILELLKVNGTLSIVGAPDKPIQLPSFPLIFGKRTVKGSIIGGIQETQEMMDLCGKYNITSDIEVVKPDDINHAMERLTKNDVRYRFVIDIAQNNTKL 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13001709 13003868 + Carg17212-RA Car01g01557 142421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01557 360 Pfam Alcohol dehydrogenase GroES-like domain 36 150 IPR013154 -
Car01g01557 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Car01g01557 360 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01557 Car-Chr1:13001709 Car03g00777 Car-Chr3:6486582 1.64E-139 dispersed
Car01g01557 Car-Chr1:13001709 Car20g00941 Car-Chr20:10326946 1.08E-101 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01557 K00083 - csv:101213170 670.618