Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01581 ATGGCTGGATCGGATGAGAACAACCCGGATGTGACCGGACGAGCAAATCTCCATGGGAGTTTACGAGTTGATGGCGGTGGCAAATTTGTAGTGGGGGCGGGTCAAAACCGCAGAGCTTTGAGCAACATTAATGGCAATGTTAGAGCTGCTCCTCCTCCCCTCCATCCCTGTGCAGTCCTCAAAAGAGGCTTAACAGAAACTGATGCTGTTCTCAACTGTAAAGTTCCTCCCATTCCGATCCATCGACCGATTACTCGGAAGTTTGCAGCTCAGCTGGCCGACAAGCAGCAGCAACCTGTGCCTGAGATTGATAGAAAGCCATTACAATCTTCTCCAACTCGAAAAGACTCAATAGATCATCACCCCATCACAGAGGAAGATGATTCTATGGACGAATCGGCAGTACCGATGTTCGTTCAACATACAAAAGCAATGTTGGATGAAATTGACAAAATGGAAGAGGTGGAAATGGAAGATATAGAAGAAGAGCCAGTCATGGACATAGACAGCTGCGATAAGAAGAACCAGCTAGCTGTTGTGGAATACATTGATGACTTGTATGCTTGCTACAGGAGAGCCGAGGTTTCTGGCTGTGTCCCACCAAACTACATGGCTCACCAAGCAGATATTAACGAGAGGATGAGAGGGATTCTTATTGACTGGCTAATTGAGGTACACTACAAGTTTGAGCTGATGGAGGAGACATTGTACCTCACAGTCAACCTGATCGATAGATTCTTGGCGGTTCAGTCGGTGGTGAGGAAGAAGCTCCAGCTTGTTGGAGTGACGGCGATGCTTATTGCCTGCAAGTACGAGGAGGTTTCTGTTCCTATTGTGGATGATCTTATTCTCATATCTGACAAGGCCTACAGCCGAAAGGAAATTCTGGACATGGAAAAGTTGATGGTAAACACCTTACAGTTCAATCTGTCTGTTCCAACACTTTATGTGTTCATGAGAAGGTTTCTCAAAGCTGCCCAATCTGATAGAGAGCTGGAGCTGCTGTCATTCTTCATGGTGGAGCTCTGTCTTGTGGAATATGAAATGCTCAAGTATAAACCTTCATTAATGGCTGCTGCTGCGGTCTTCACTGCTCAGTGCACCATCAATGGGTTCAAGGAATGGAGCAAAACCAGTGAGTGGCACACTGGGTATTCTCAGGAGCAGCTTCTGGAATGTTCACGTTTGATGGTGGAGTTTCATGAGAAAGCAGGGACAGGAAAATTGACAGGAGTTCACAGGAAGTACAGCACATCCAAGTTTGGATATGCTGCAAGAAGTGAACCAGCAAGCTTTCTGTTGGAAGAAGAAAGGCCATAG 1320 46.36 MAGSDENNPDVTGRANLHGSLRVDGGGKFVVGAGQNRRALSNINGNVRAAPPPLHPCAVLKRGLTETDAVLNCKVPPIPIHRPITRKFAAQLADKQQQPVPEIDRKPLQSSPTRKDSIDHHPITEEDDSMDESAVPMFVQHTKAMLDEIDKMEEVEMEDIEEEPVMDIDSCDKKNQLAVVEYIDDLYACYRRAEVSGCVPPNYMAHQADINERMRGILIDWLIEVHYKFELMEETLYLTVNLIDRFLAVQSVVRKKLQLVGVTAMLIACKYEEVSVPIVDDLILISDKAYSRKEILDMEKLMVNTLQFNLSVPTLYVFMRRFLKAAQSDRELELLSFFMVELCLVEYEMLKYKPSLMAAAAVFTAQCTINGFKEWSKTSEWHTGYSQEQLLECSRLMVEFHEKAGTGKLTGVHRKYSTSKFGYAARSEPASFLLEEERP 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13104446 13107410 - Carg21374-RA Car01g01581 142445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01581 439 MobiDBLite consensus disorder prediction 1 24 - -
Car01g01581 439 MobiDBLite consensus disorder prediction 91 132 - -
Car01g01581 439 ProSitePatterns Cyclins signature. 215 246 IPR006671 -
Car01g01581 439 MobiDBLite consensus disorder prediction 108 128 - -
Car01g01581 439 Pfam Cyclin, N-terminal domain 186 311 IPR006671 -
Car01g01581 439 Pfam Cyclin, C-terminal domain 313 427 IPR004367 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01581 Car-Chr1:13104446 Car04g01296 Car-Chr4:7500349 2.40E-60 dispersed
Car02g01078 Car-Chr2:7486804 Car01g01581 Car-Chr1:13104446 5.04E-89 transposed
Car19g00883 Car-Chr19:9117124 Car01g01581 Car-Chr1:13104446 1.78E-75 transposed
Car01g01581 Car-Chr1:13104446 Car03g00582 Car-Chr3:5526061 1.71E-167 wgd
Car01g01581 Car-Chr1:13104446 Car07g00340 Car-Chr7:1703286 3.11E-162 wgd
Car01g01581 Car-Chr1:13104446 Car09g00048 Car-Chr9:245604 3.61E-61 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01581 K21777 - csv:101223199 745.347