Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01585 ATGAGCTGCTTTTCTTGCATTCGCACTCGTTGTAATGACGCCAGCAAGGTCGAAATTGACAATGAAACTGGAAAAGGGAAGGAATCACAACCCAGAAGTGGAAACAACCGGAAATGTGGGGCTGCTCGAAGCTTCCCATTTCGCGAATTGGCAACGGCGACGAGAGGTTTCAAGGAAGTGAACTTGATTGGTGAAGGCGGGTTTGGAAGAGTTTACAAAGGCCGATTAGAGTCAGGCCAGGTTGTTGCTATTAAGCAACTCAATCACGACGGTCTTCAAGGATTTCAGGAATTTATCGTCGAAGTTCTCATGTTAAGCCTATTGCATCACTGTAATCTTGTTACATTGATCGGTTACTGTACCGATGGAGACCAAAGGCTGTTGGTATACGAGTACATGTCGATGGGAAGCTTGGAAAACCATCTTTTCGGTTTGTCCCCCGAACGACCGCCATTGAGTTGGAACACTCGAATCAAAATTGCTCTTGGTGCAGCCCGGGGCCTTGAGTATCTTCACTGCACAGCCAATCCACCAGTTATCTACCGTGACTTGAAATCTGCAAATATCTTACTGGATGACGAGTTCAATCCAAAGCTCTCGGATTTCGGACTGGCAAAGTTAGGACCGGTCGGTGACAACACCCATGTTTCTACCAGAGTGATGGGAACATATGGTTATTGTGCTCCGGAGTATGCCATGAGCGGCAAACTTACTCTGAAATCTGATATCTATTGCTTTGGTGTGGTTCTCTTGGAGATAATTACAGGTAGGAAAGCAATAGACACCACCAAGAAACCTGGAGAGCAAAACCTGGTTGCTTGGTCTCGCCCGTTTATTAAAGACCGGAGGAAGTTTGTTCAATTAGTCGACCCACTACTAGAAGGATGCTACCCTGTTCGTTGTCTACACCACGCGATCGCAATTGCTGCAATGTGTCTCCAGGAGCAGCCAACATTCAGACCAATTATCAGTGATATCGTCGTGGCTCTTGAATACTTAGCTTCTCAGAGTTACGCATCAGAACAACCGAGAGACGGGGCGGCGCCTAATCCCTCCAAACTATCTCCTCAACGAGACAGGAGTCATGGAAAAAGCTCTACATCCAAGTAA 1110 46.76 MSCFSCIRTRCNDASKVEIDNETGKGKESQPRSGNNRKCGAARSFPFRELATATRGFKEVNLIGEGGFGRVYKGRLESGQVVAIKQLNHDGLQGFQEFIVEVLMLSLLHHCNLVTLIGYCTDGDQRLLVYEYMSMGSLENHLFGLSPERPPLSWNTRIKIALGAARGLEYLHCTANPPVIYRDLKSANILLDDEFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYCFGVVLLEIITGRKAIDTTKKPGEQNLVAWSRPFIKDRRKFVQLVDPLLEGCYPVRCLHHAIAIAAMCLQEQPTFRPIISDIVVALEYLASQSYASEQPRDGAAPNPSKLSPQRDRSHGKSSTSK 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13138239 13140634 - Carg21370-RA Car01g01585 142449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01585 369 ProSiteProfiles Protein kinase domain profile. 57 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01585 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Car01g01585 369 ProSitePatterns Protein kinases ATP-binding region signature. 63 85 IPR017441 GO:0005524
Car01g01585 369 MobiDBLite consensus disorder prediction 340 369 - -
Car01g01585 369 Pfam Protein kinase domain 57 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01585 369 MobiDBLite consensus disorder prediction 20 40 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01585 Car09g00044 CCT
Car01g01585 Car09g00044 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01585 Car-Chr1:13138239 Car06g01271 Car-Chr6:9107178 5.63E-167 dispersed
Car01g01585 Car-Chr1:13138239 Car05g00857 Car-Chr5:8427923 3.54E-84 wgd
Car01g01585 Car-Chr1:13138239 Car09g00044 Car-Chr9:208991 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88618 PF00069 Pkinase 3.20E-44 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01585 - - csv:101203407 684.1