Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01594 ATGGCTACGGGTATAGATTTTTCACCTCCCTTTGCCCTACTAGAAGGCGGCGGGTACAGTAAGGACAATGTATCAGCGACAAATGACGAAAGTTCTGATAGCTTTAATAGTTTGAAACAGATGACCACTGGGAAACCTCCCCGACACCTCTCGGTTTCGCGGCATAGTGTGAGCTCTATAAAGCTGCTAGACCAAGCTGATTTAAGCTTGGATGCTGATACTCTTGGGAATAATTCGCCTGATGGGAAAGCAGGATTCTTACCTGTCTTCAGATCGGGTAGCTGTTCAGAAAGGGGACCTAAGCAGTACATGGAAGATGAGCACATATGCATAGATGATCTTGTAGAACACATTCATGCATGTGCAGATTTCACTTCTCCTGGAGCTTTCTATGGTGTGAGTATCCCTTTTCACCTGGATAACATTTTGACCTTGGTTCTCTTGGATGCGCTCTTTAACGTTGTACTTGGTGGAATTGATGTGTGGCAGGTATTTGATGGCCATGGGGGTACAGATGCAGCAGCTTTTGTCAGAAATAACATCCTTAGATTCATAGTCGAGGACTCCTGTTTTCCAGTTAGTGTAGATAAGGCAATTAAGAGTGCTTTTTTGAAAGCTGATTATGCATTTGCTGATGCTAGTTCTCTGGATATCTCCTCCGGCACAACTGCGCTAACTGCTTTCATTTTTGGAAGAACAATGATTATTGGGAATGCCGGAGATTGTCGAGCAGTTCTGGGGAGGAGGGGCAAGGCTATTGAGGTGTCAAAGGATCACAAGCCCAATTGTGCATCTGAAAAACTCAGAATAGAGAAGCTCGGGGGAGTGATTTATGATGGCTACCTGAATGGTCAGTTATCTGTTGCGCGTGCTATAGGAGACTGGCACATGAAAGGTGCCAAGGGTTCTGCATGCCCGCTGAGTGCAGAGCCAGAGCTGCAGGAATTGCAATTGAGCGAGGAAGATGAATTTCTAATTATGGGCTGCGATGGTCTTTGGGATGTGATGAGCAGTCAATATGCTGTTACAATGGCAAGGAAAGAGCTGATGCTGCATAATGATCCTGAAAGATGTTCAAGAGAGCTGGTAAGAGAGGCGCTGAAGCGCAATACATGCGATAATTTAACCGTTATTGTAGTCTGTTTTTCTGCTGATCCGCCCCCTCGGATAGAAATTCCCCCAACTCGAGTAAGGAGAAGCATATCATTAGAAGGACTGAATTTGTTGAAAGGTGTACTGGACTGCAATTCATGA 1254 45.14 MATGIDFSPPFALLEGGGYSKDNVSATNDESSDSFNSLKQMTTGKPPRHLSVSRHSVSSIKLLDQADLSLDADTLGNNSPDGKAGFLPVFRSGSCSERGPKQYMEDEHICIDDLVEHIHACADFTSPGAFYGVSIPFHLDNILTLVLLDALFNVVLGGIDVWQVFDGHGGTDAAAFVRNNILRFIVEDSCFPVSVDKAIKSAFLKADYAFADASSLDISSGTTALTAFIFGRTMIIGNAGDCRAVLGRRGKAIEVSKDHKPNCASEKLRIEKLGGVIYDGYLNGQLSVARAIGDWHMKGAKGSACPLSAEPELQELQLSEEDEFLIMGCDGLWDVMSSQYAVTMARKELMLHNDPERCSRELVREALKRNTCDNLTVIVVCFSADPPPRIEIPPTRVRRSISLEGLNLLKGVLDCNS 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13166860 13170517 - Carg21361-RA Car01g01594 142458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01594 417 MobiDBLite consensus disorder prediction 21 51 - -
Car01g01594 417 MobiDBLite consensus disorder prediction 18 51 - -
Car01g01594 417 Pfam Protein phosphatase 2C 161 374 IPR001932 -
Car01g01594 417 ProSiteProfiles PPM-type phosphatase domain profile. 91 382 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01594 Car09g00033 CCT
Car01g01594 Car09g00033 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01594 Car-Chr1:13166860 Car05g01168 Car-Chr5:11118947 1.33E-102 dispersed
Car11g00269 Car-Chr11:1476101 Car01g01594 Car-Chr1:13166860 5.38E-28 dispersed
Car01g01594 Car-Chr1:13166860 Car09g00033 Car-Chr9:162494 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01594 K14803 - csv:101205355 697.582