Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01609 ATGGAGAAGGGGCCGACCACTGTTTCAGCCATGGAGGCTTTCGAGAAGCTAGAGAAGGTCGGAGAAGGAACTTATGGCAAAGTTTATAGGGCAAGGGAGAAGGCCACCGGCAAGATTGTAGCGCTTAAGAAGACGCGCCTCCACGAGGACGAGGAAGGTGTTCCTCCCACTACTCTTAGAGAGGTTTCAATTCTTCGAATGCTTTCTCGGGATCCTCATATTGTTAGGTTGATGGATGTGAAACAAGGGCAGAACAAGGAAGGGAAAACCGTTCTTTACTTGGTGTTTGAATACATGGATACTGATCTGAAAAAATTCATCAAGAGTTTCCGTCATACGGGAGAAAGCATTCCCGTCAACACTGTCAAGAGTCTGATGTACCAACTCTGCAAGGGCGTTGCCTTCTGCCATGGTCATGGAATCCTGCACAGGGACCTGAAACCACACAATCTCTTGATGGACCGAAAGACTATGATGCTCAAAATTGCAGACCTTGGACTCGCTCGAGCATTTACTTTGCCAATTAAGAAGTATACTCACGAGGCAATTGTGTTTTACACATGGCGTGGTAGAATTAGAACGATCCATTGTTTTATACTGACCCTCTGGTATAGAGCTCCTGAAGTTCTGTTGGGAGCTACTCATTACTCCACTGCTGTAGATATGTGGTCTGTTGGCTGCATATTCGGTATCTTTCTATCCCCCGAACTTGCCACCAAGCAGGCGCTCTTTCCTGGAGATTCTGAGTTGCAACAGCTCCTTCATATCTTCAGGCTATTAGGGACCCCAAATGAAAAAGTTTGGCCTGGTGTGAGCAAACTAATGAACTGGCACGAGTATCCCCAGTGGAACCCCCAAAGCCTTTCAACAGCTGTCCCCAACTTGGATGATAAAGCGCTAGATCTGCTTGCACAAATGTTGAAGTATGAACCCTCAAAGCGTATTTCAGCGAAGAGAGCAATGGAACATCCTTATTTTGATGACTTGAACAAGGCATATCTCTGA 1005 46.27 MEKGPTTVSAMEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHIVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIKSFRHTGESIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTLPIKKYTHEAIVFYTWRGRIRTIHCFILTLWYRAPEVLLGATHYSTAVDMWSVGCIFGIFLSPELATKQALFPGDSELQQLLHIFRLLGTPNEKVWPGVSKLMNWHEYPQWNPQSLSTAVPNLDDKALDLLAQMLKYEPSKRISAKRAMEHPYFDDLNKAYL 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13219060 13220960 + Carg21346-RA Car01g01609 142473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01609 334 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Car01g01609 334 ProSiteProfiles Protein kinase domain profile. 14 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01609 334 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Car01g01609 334 Pfam Protein kinase domain 14 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01609 Car-Chr1:13219060 Car07g01149 Car-Chr7:6937306 1.60E-142 dispersed
Car01g01609 Car-Chr1:13219060 Car04g01486 Car-Chr4:8651086 2.27E-101 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88619 PF00069 Pkinase 5.80E-66 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01609 K07760 - csv:101208001 601.282