Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00029 ATGCCTTTTGGGGCTCTATTGGCTATCCACGCTTTGCTTTCTTTCCCTTTCTGGGTTCCTGGAGGAACGCCGAAATCTGGGTCTATCTTCGATTGCTTCATCAGAAAAAAATCTAAACGATCCATGGATAAATTCCCCATGTCCCAGATACCTAATTTTTCAAAAGATATCAGGATAGACCAGGTTGGGGCTCAAACTCAAACTCAAACTCAAACTCCCAATGACCACCCCGAAAATCGACTTCTTTCGGTTGATATCAAAAGGAATGATGAAAACTCTGAAGTTATGGCTGTGACAAAATCAACTGAGCCTGATAATAACAGCCAAGGCAGTTCGAATTATCGACACGAAAAAGCAGGCAATTCACAATCAGGGGAAGAAGGAAGCTCTGGAAAAGCTAGATCGTATGGAGGAATTGTGCCACCGTCGCCTCTCGTAGGCTTGCCAGAAGTTTCACATCTTGGATGGGGTCACTGGTTCACTCTCAGGGATCTACAGCTTGCAACGAATCGTTTTTCGTCCGAAAATATTCTTGGAGAGGGAGGATATGGGGTTGTATATAAAGGCAGACTCATCAATGACACTGAAGTTGCCGTGAAAAAGCTTCTCAATAATCTGGGTCAGGCAGAGAAAGAATTTCGAGTCGAAGTGGAGGCTATTGGCCATGTTCGACATAAGAATCTCGTTCGATTGCTCGGTTATTGCATAGAAGGCGTTCATAGGATGCTAGTCTATGAATATGTGAACAATGGCAATCTAGAACAGTGGCTACATGGAGCCATGAGCCAACACGGCACGCTTACGTGGGAGGCTCGTATGAAGGTGCTTCTTGGCACTGCGAAGGCGCTTGCGTATTTACACGAAGCAATCGAGCCAAAAGTTGTTCATAGAGATATAAAATCAAGCAACATTTTGATCGATGATGAGTTCAATGCCAAAGTTTCCGATTTCGGATTGGCCAAACTCTTGGACTCTGGGGAGAGTCATATCACAACTAGAGTTATGGGAACATTTGGGTATGTGGCACCTGAATATGCAAATACCGGTTTGTTGAACGAAAAGAGTGACATTTATAGCTTCGGCGTTCTCTTGCTAGAAGCAATTACAGGGAGAGACCCGGTGGATTATGCCCGTCCTTCTAATGAGGTTAATCTTGTTGAGTGGCTAAAGATGATGGTAGCAACAAGGAGGGCAGAGGAAGTTGTGGACATGAATCTCGACGTAAAGCCTACTACTCGAGCATTGAAACGTGCCCTTCTCGTTGCACTTCGGTGTATCGATCCCGAATCAATCAAGAGACCCAAGATGAGCCAAGTTGTAAGGATGCTCGAAGCCGATGAATTTCCACTTCACGAGGTTCGGCTAGGAAACCCGAGTCATTTGAGTTTACAAGAATGCATTGTCATGTCACTATATCATCTGGGTATGTCCACAGTGAGGACACTGGCTCTGAGGTGGCTCCGAAGAGAGTTGGTTGATAGAAGAAACCGAAAAAGCCGATCAATAAGCTTGGAGATCGAGCCGTTGAACGAAATATCAGGTTGTGATCAGATGGGTGGGGCATCAGAGACAAGCCATGGAGGATAG 1587 45.24 MPFGALLAIHALLSFPFWVPGGTPKSGSIFDCFIRKKSKRSMDKFPMSQIPNFSKDIRIDQVGAQTQTQTQTPNDHPENRLLSVDIKRNDENSEVMAVTKSTEPDNNSQGSSNYRHEKAGNSQSGEEGSSGKARSYGGIVPPSPLVGLPEVSHLGWGHWFTLRDLQLATNRFSSENILGEGGYGVVYKGRLINDTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMSQHGTLTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYARPSNEVNLVEWLKMMVATRRAEEVVDMNLDVKPTTRALKRALLVALRCIDPESIKRPKMSQVVRMLEADEFPLHEVRLGNPSHLSLQECIVMSLYHLGMSTVRTLALRWLRRELVDRRNRKSRSISLEIEPLNEISGCDQMGGASETSHGG 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 243027 246342 + Carg13642-RA Car02g00029 142515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00029 528 ProSiteProfiles Protein kinase domain profile. 172 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00029 528 MobiDBLite consensus disorder prediction 96 130 - -
Car02g00029 528 Pfam Protein kinase domain 173 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00029 528 Coils Coil 192 212 - -
Car02g00029 528 ProSitePatterns Protein kinases ATP-binding region signature. 178 201 IPR017441 GO:0005524
Car02g00029 528 MobiDBLite consensus disorder prediction 96 134 - -
Car02g00029 528 ProSitePatterns Serine/Threonine protein kinases active-site signature. 294 306 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00029 Car-Chr2:243027 Car05g00148 Car-Chr5:745968 9.03E-165 dispersed
Car11g01646 Car-Chr11:12954273 Car02g00029 Car-Chr2:243027 0 wgd
Car19g00857 Car-Chr19:8942705 Car02g00029 Car-Chr2:243027 1.63E-69 wgd
Car02g00029 Car-Chr2:243027 Car20g00227 Car-Chr20:1307189 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88621 PF00069 Pkinase 1.60E-48 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00029 - - csv:101214087 763.066