Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00030 ATGGTACCGAGCTATGAGCTATGTTGGTTCTCTTTTTCTCCCAAGTATACACCTGCAATTGATATTTGGAGTATTGGCTGCATATTTGCTGAAGTATTAATGGGGAAGCCACTTTTTCCTGGCAAAAACGTTGTTCACCAGCTCGATTTGATGACGGACCTTCTTGGAACTCCTTCATTAGATACAATCTCCAGGGTTCGTAACGACAAGGCTAGACGATATTTAACGACCATGCGGAAAAAGCAGCCGGTTTCATTTGCTCAAAAGTTTCCAAATGCTGATCCTTTAGCGCTGAGGCTATTAGAAAGGTTGCTTGCTTTTGATCCAAAAGATAGGCCAACTGCTGAAGAGGCATTGGCAGATCCATACTTCAAGGGATTGGCGAAAATTGAGAGGGAACCTTCCTGCCAGCCAATCACAAAGATGGAATTTGAATTTGAGAGGCGGAGGGTAATAAAAGAAGACATTCAAGAGCTAATCTTCCGTGAGATATTAGAATATCATCCCCAGCTACTAAAAGACTACATGAATGGGACTGAGAGAACAAATTTTCTATATCCAAGTGCTGTTGATCAATTTAGAAAGCAGTTTGCACATCTGGAGGAAAATGGTGGTAAAAGTGCACCGGCAATTCCTCTTGACAGAAAGCACGTATCCCTCCCAAGGTCAACAGTTGTACACTCGAACCCGGTCTATTCTAAGGACCAACTAAACAACGTACCCGTCCAAGATGGGAAGATCTCCGAACAGGCATACAGCAAGAATTCCAGAGATAGCGAAGGGCGGCTAACAAATATATCAAGAACCATGCAGGCACCCCAAAAGATCCCATTTGCAGCCAAGCCTGGAAGAGTGGTTGGACCAGTTATAGCAGATGAGAGCGGAATGCGAGTGAAGGAACCATACGATCCTAGAACGTTGATCAGAGGTGCCATTCTTCCTCCTGCATATCATTACCAGAAACCCTATGCAGCAAATCAAGAAAGATCTGCAGCAGAAACGAAACTAGATATTTCACTAAGGGCCACCAAGCAAGCTTCCCAGTGTGGCATGGCTTCCAAAATAGGAACAGACATAGCCATCAGCATTGACTCGAACCCCTTTTATATGACACGTGCCGGAGTGAACAAGGTCGAACTCAAGGACCAAATATCCATCGACGCTAACTTTCTACAGGCCAAGGCCTCCCAATACAGTGGCATTGGTGCAGCAACCGCCACCACCACCTCGGTTGCTCACAGAAAGGTCGTTGCCGGTCAGTTTAGCATGACAAAGATGTACTAA 1284 45.17 MVPSYELCWFSFSPKYTPAIDIWSIGCIFAEVLMGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTTMRKKQPVSFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPITKMEFEFERRRVIKEDIQELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGGKSAPAIPLDRKHVSLPRSTVVHSNPVYSKDQLNNVPVQDGKISEQAYSKNSRDSEGRLTNISRTMQAPQKIPFAAKPGRVVGPVIADESGMRVKEPYDPRTLIRGAILPPAYHYQKPYAANQERSAAETKLDISLRATKQASQCGMASKIGTDIAISIDSNPFYMTRAGVNKVELKDQISIDANFLQAKASQYSGIGAATATTTSVAHRKVVAGQFSMTKMY 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 250886 256623 + Carg13641-RA Car02g00030 142516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00030 427 ProSiteProfiles Protein kinase domain profile. 1 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00030 427 Pfam Protein kinase domain 15 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00030 Car-Chr2:250886 Car17g00253 Car-Chr17:1566217 8.16E-127 dispersed
Car11g01641 Car-Chr11:12935511 Car02g00030 Car-Chr2:250886 5.34E-158 wgd
Car19g00847 Car-Chr19:8898907 Car02g00030 Car-Chr2:250886 1.23E-153 wgd
Car02g00030 Car-Chr2:250886 Car20g00224 Car-Chr20:1293519 1.98E-84 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88622 PF00069 Pkinase 5.20E-14 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00030 - - csv:101216657 766.918