Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00035 ATGGATTCTAATGTACGAGCTCGTTTCACACTCGGCAAACAGTCGTCGCTCCAGCCGGAACGGCAAGGCTCGACAGCGGTTGCCGAGGAGTTGGATGATTCGATCGCGATTGATCCTGGGATTAAGCTGATGTACCTGTCGAATGATGGCGACTCGGATGGGATTAGAGAGCTGCTGGATTCGGGTGCCGACGTGAATTTTCGCGACATTGACGGCCGAACCTCTTTGCATGTTGCTGCTTGTCAGGGCAGGCCAGAGATTGTTGAGATACTACTCGAAAGAGGAGCGGAGGTCGACGTTCAGGACCGATGGGGCAGCACGCCTCTTGCAGATGCCATATATTACAAGAATCAGGAAGTGATCAAGCTCTTAGAGAAACATGGTGCTAGGCTACCGATGGCTCCAATGCTTGTGCAAAATGCTCTTGAAGTCCCGGAATATGAGATCAATCCAAATGAGCTTGATTTTTCTAAGAGTGTGAACATTACAAAAGGAACTTTCTGCATTGCATCATGGCGGGGAATTGAAGTTGCTGTGAAAACACTAGGAGAGGAAGTTTTCACTGATGAGGATAAAGTGAAGGCATTCAGGGATGAACTTGCTTTACTTCAAAAGATACGGCATCCTAACGTTGTCCAATTTTTGGGAGCTGTAACACAAAGTAGTCCAATGATGATTGTCATGGAGTATTTGCCACAGGGAGACCTTCATGCATACTTGAAACGGAAAGGTTCCTTGAAGCTAGCAACAGTTGTTAAGTTTGCTCTTGACATTGCTAGGGGAATGAATTATCTGCATGAGCATAAACCTGAAGCAATAATTCATCGCGATCTTGAACCTTCGTATGTTTTTGTCTCTTCTCCCTTACCATTTTATCTTTAG 882 45.8 MDSNVRARFTLGKQSSLQPERQGSTAVAEELDDSIAIDPGIKLMYLSNDGDSDGIRELLDSGADVNFRDIDGRTSLHVAACQGRPEIVEILLERGAEVDVQDRWGSTPLADAIYYKNQEVIKLLEKHGARLPMAPMLVQNALEVPEYEINPNELDFSKSVNITKGTFCIASWRGIEVAVKTLGEEVFTDEDKVKAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVMEYLPQGDLHAYLKRKGSLKLATVVKFALDIARGMNYLHEHKPEAIIHRDLEPSYVFVSSPLPFYL 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 281957 286012 - Carg13636-RA Car02g00035 142521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00035 293 ProSiteProfiles Ankyrin repeat region circular profile. 71 103 - -
Car02g00035 293 ProSiteProfiles Protein kinase domain profile. 121 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00035 293 Pfam Protein tyrosine and serine/threonine kinase 170 286 IPR001245 GO:0004672|GO:0006468
Car02g00035 293 MobiDBLite consensus disorder prediction 1 25 - -
Car02g00035 293 Pfam Ankyrin repeats (3 copies) 43 130 IPR002110 GO:0005515
Car02g00035 293 MobiDBLite consensus disorder prediction 1 23 - -
Car02g00035 293 ProSiteProfiles Ankyrin repeat profile. 71 103 IPR002110 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00035 Car-Chr2:281957 Car18g00413 Car-Chr18:2588834 6.27E-140 dispersed
Car02g00035 Car-Chr2:281957 Car20g00218 Car-Chr20:1256883 6.27E-167 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88624 PF07714 PK_Tyr_Ser-Thr 8.40E-29 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00035 - - csv:101218932 501.516