Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car02g00035 | ATGGATTCTAATGTACGAGCTCGTTTCACACTCGGCAAACAGTCGTCGCTCCAGCCGGAACGGCAAGGCTCGACAGCGGTTGCCGAGGAGTTGGATGATTCGATCGCGATTGATCCTGGGATTAAGCTGATGTACCTGTCGAATGATGGCGACTCGGATGGGATTAGAGAGCTGCTGGATTCGGGTGCCGACGTGAATTTTCGCGACATTGACGGCCGAACCTCTTTGCATGTTGCTGCTTGTCAGGGCAGGCCAGAGATTGTTGAGATACTACTCGAAAGAGGAGCGGAGGTCGACGTTCAGGACCGATGGGGCAGCACGCCTCTTGCAGATGCCATATATTACAAGAATCAGGAAGTGATCAAGCTCTTAGAGAAACATGGTGCTAGGCTACCGATGGCTCCAATGCTTGTGCAAAATGCTCTTGAAGTCCCGGAATATGAGATCAATCCAAATGAGCTTGATTTTTCTAAGAGTGTGAACATTACAAAAGGAACTTTCTGCATTGCATCATGGCGGGGAATTGAAGTTGCTGTGAAAACACTAGGAGAGGAAGTTTTCACTGATGAGGATAAAGTGAAGGCATTCAGGGATGAACTTGCTTTACTTCAAAAGATACGGCATCCTAACGTTGTCCAATTTTTGGGAGCTGTAACACAAAGTAGTCCAATGATGATTGTCATGGAGTATTTGCCACAGGGAGACCTTCATGCATACTTGAAACGGAAAGGTTCCTTGAAGCTAGCAACAGTTGTTAAGTTTGCTCTTGACATTGCTAGGGGAATGAATTATCTGCATGAGCATAAACCTGAAGCAATAATTCATCGCGATCTTGAACCTTCGTATGTTTTTGTCTCTTCTCCCTTACCATTTTATCTTTAG | 882 | 45.8 | MDSNVRARFTLGKQSSLQPERQGSTAVAEELDDSIAIDPGIKLMYLSNDGDSDGIRELLDSGADVNFRDIDGRTSLHVAACQGRPEIVEILLERGAEVDVQDRWGSTPLADAIYYKNQEVIKLLEKHGARLPMAPMLVQNALEVPEYEINPNELDFSKSVNITKGTFCIASWRGIEVAVKTLGEEVFTDEDKVKAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVMEYLPQGDLHAYLKRKGSLKLATVVKFALDIARGMNYLHEHKPEAIIHRDLEPSYVFVSSPLPFYL | 293 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 281957 | 286012 | - | Carg13636-RA | Car02g00035 | 142521 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car02g00035 | 293 | ProSiteProfiles | Ankyrin repeat region circular profile. | 71 | 103 | - | - | |
Car02g00035 | 293 | ProSiteProfiles | Protein kinase domain profile. | 121 | 293 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car02g00035 | 293 | Pfam | Protein tyrosine and serine/threonine kinase | 170 | 286 | IPR001245 | GO:0004672|GO:0006468 | |
Car02g00035 | 293 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Car02g00035 | 293 | Pfam | Ankyrin repeats (3 copies) | 43 | 130 | IPR002110 | GO:0005515 | |
Car02g00035 | 293 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Car02g00035 | 293 | ProSiteProfiles | Ankyrin repeat profile. | 71 | 103 | IPR002110 | GO:0005515 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car02g00035 | Car-Chr2:281957 | Car18g00413 | Car-Chr18:2588834 | 6.27E-140 | dispersed | |
Car02g00035 | Car-Chr2:281957 | Car20g00218 | Car-Chr20:1256883 | 6.27E-167 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
88624 | PF07714 | PK_Tyr_Ser-Thr | 8.40E-29 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car02g00035 | - | - | csv:101218932 | 501.516 |