Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00052 ATGAAATTTGAAGAGCAGAGCTTGAAGCAACAGTCGGAACAGATATGCAAGACTGTTGAGGTCGACGTAATTGATCACCATCGCACTGCATCGTCGCTGGTCGAATTGGAAGCTTCTGAAGATTGCGAGAGGGATGGACCGGATGGTGACGGCCTCTATATTCCTCCCCTCAACTTTTCCATGGTTGATAATGGCATTTTCCGCTCCGGCTTCCCTAATTCTGCTAACTTCTCCTTCCTCCAAACCCTAGGCCTCCGTTCCATTATATGTCTATGTCCGGAGCCGTATCCGGAACACAACATGGAGTTTCTCAAGTCTAACGGAATCAGATTGTATCAATTTGGAATCGAGAGCTATAAGGAGCCTTTTGTGAATATCCCAGATGATATGATTCGTGAAGCACTGAAAGTTGTCCTTGGTACTACTGAATATCATCTTAAAAACGATAGAAATCATCCAATCCTCATACATTGCAAGAGAGGAAAGAGGTGGTGCCTCACTTCTGTGTTTGATGAGTACCAGAGATTTGCAGCTGCAAAAGCAAGAATTTCAGACCAGAGGTTTATGGAATTGTTCGATATCTCCGACTTGAGGCATCTTCCCATGTCATTCGCATGCTCAAAGAGAGTAATGACGAATGTTTACATTTGTACACTTCCAGATTTCTTTGGTGGTTCGGGTGGCATTCATTAG 693 44.01 MKFEEQSLKQQSEQICKTVEVDVIDHHRTASSLVELEASEDCERDGPDGDGLYIPPLNFSMVDNGIFRSGFPNSANFSFLQTLGLRSIICLCPEPYPEHNMEFLKSNGIRLYQFGIESYKEPFVNIPDDMIREALKVVLGTTEYHLKNDRNHPILIHCKRGKRWCLTSVFDEYQRFAAAKARISDQRFMELFDISDLRHLPMSFACSKRVMTNVYICTLPDFFGGSGGIH 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 359848 363754 + Carg13619-RA Car02g00052 142538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00052 230 Pfam Tyrosine phosphatase family 53 196 IPR004861 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00052 Car11g01620 CCT
Car02g00052 Car20g00205 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00052 Car-Chr2:359848 Car11g00841 Car-Chr11:5046967 2.63E-64 dispersed
Car11g01620 Car-Chr11:12839350 Car02g00052 Car-Chr2:359848 7.75E-87 wgd
Car19g00825 Car-Chr19:8790672 Car02g00052 Car-Chr2:359848 4.15E-83 wgd
Car02g00052 Car-Chr2:359848 Car20g00205 Car-Chr20:1163440 4.27E-117 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00052 K18045 - csv:101222170 330.872