Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00070 ATGGAGGATCAGCGAGATGATGTTGCACAATCAGAGCAAGGGCCTTCCAATGCTACCTGGTGGTCTTCTGATTTCGTGGAGAAATTTGGATCTGTTTCTTTGGGCCCTCGGGAAGATACTGTAAATGAAAAGGAAGAGCTCATCAATTCTGACCAAGATGCGTTGTTGTCGCCTCAAAGAGCATCTCAAATTCTCTGGCGTACTGGAATGCTTTGTGAACCAATTCCAGATGGTTTCTATTCTGTTATTCCGGACAAAAGGCTAAAAGAGCAGTTTCACAATATTCCTTCGCTGGATGAGCTTCGTGCTTTGGAGGCTGAAGGTTACAAAAACGATGTTATTCTTGTGGAGACGGAGAAAGATAAAAAGCTTTCTATGCTGAAGCAACTGATCTTGACACTGGTTAAAGGATTGAGTTCAAATCCAGCTGCAATTATCAAGAAGATCGCAGGACTGGTTTCTGACTTTTATAAACGACCAATTTTAGAAAGTCCAGCAAAAGCCGCTGTAGAGGAAACCTCCCACTTGTTTGAGGATAGAGGCATTCAATTACTTGGACAAATAAAATTTGGTTCATGCCGTCCAAGAGCCATCTTATTTAAGTCTCTGGCAGACACAGTAGGGCTCGAAAGCCGTCTCATGGTGGGCTTGCCAAATGAGGGGGCTATTGGGTGCGTGGACTCATACAAGCATATGTCTGTGACAGTTGTGTTGAATTCTGTGGAACTAGTCGTTGATCTTATGCGATTTCCTGGCCAGTTGTTACCTCGGTCAACTAAGGCAATTTTTATGACCCATATTTCTGCTGCTGGGGAAAGTGATTCTGCAGAAAACGACTCCTGTGATTCACCTCTGGAACCTAATAGTCCTCTTTATGGGTTCTCAGAGAGAGTTGATCCCGACAGTGTTGAAAAAGATGAGAGCCTTCAATTCCACAGAAAATTTGATGCAGCTTCTAATGCATATGGTCCTAAATTGCGCAACTGGATGTTGCGTTCAAGTACAACACTTGACAGCAAACTGAGTTTATCACATAGTGAACCTAACATTGCAAATGCATTTTGGCGACGTAGTCGGAGAAAGGATATTGCTGAACAGCGGACTGCTAGTTCAAGTCCAGAGCATCCTTCATTTCGGGCGCGTGGCCGGTCCATGCTTAGTGGGGATAGGAAAGTCTTCAGAGATTTTTCTGATGATGTATCTACTTCAAGATCAGATGGCGCTTCAACTTCAGAAGCACGTCGAATAAGAAGAAGGAGCATCAGCATTACTCCAGAGATTGGTGATGATATCGTGAGGACTGTGCGAGCAATGAATGAAACAATGAAGCAAAATCGTCTTTTGAGAGGACAAACAGATGACAGGTCGTTCTCCCACCCTTCAAATGAACGAAATAGTAGTTCAGATGTTCGGAGAAATGATCCATTGGGTTCTCAAAGAGCAATATCATTACCAACATCGCCACATGAGTATAGGGGTCAAACCTCTGATAGAAGTGAACATTCGGCATTTGCGAATGATGATTTAGCCTCAAAATGGACTAAAGTTCTTGAATCTTTCTCCATGAACGACAAACCACTATTACCTTACCCAGAATGGAACATTGATTACTCAGAACTCACAGTTGGAATCCGTATTGGAATTGGGTTTTTTGGAGAAGTTTTTCGTGGCATTTGGAATGGAACAGATGTGGCGATCAAAGTTTTCCTAGAGCAAGATCTAACTCCTGAAAACATTGAAGACTTCTGTAATGAGATATCAATTCTTAGTCGTCTTCGGCATCCTAATGTTTTATTGTTTCTGGGTGCATGCACAAAGCCGCCACGATTATCAATGGTCAGTGAATACATGGAAATGGGCTCCTTGTATTCCTTGATCCATTTGAGTGGTCAGAAAAAAAAACTAAGCTGGCGGAGAAGACTAAAGATGTTACGTGACATATGCAGGGGTTTGATGTGCATACATCGAATGAAAATAGCTCATCGGGACCTAAAAAGTGCAAATTGCCTAGTGAACAAGCATTGGACTGTCAAGATATGTGATTTTGGACTTTCAAGAGTATTGACTGAGGCTCCAGCAAGAGGGTCTCCATCTGCAGGAACTCCAGAATGGATGGCTCCCGAGCTCTTCCGAAACGAACCCTTCACTGAAAAGTGTGATATTTTCAGCCTGGGGGTCATTATGTGGGAGCTATGCACGCTAAGTAGACCGTGGGAGGGTGTTCCACAAGAGAGGGTTGTTTATGCTGTTGGCACCGAGGGAGCACGCCTAGAGATTCCTGAAGGACCCCTTGGCAGACTTATATCAGATTGTTGGGCAGAACCAAATGAACGGCCAAGCTGCGAAGAGATTCTCTCACGCTTGCTCGACTGCGAGTACTCGCTTTCTTGA 2391 43.79 MEDQRDDVAQSEQGPSNATWWSSDFVEKFGSVSLGPREDTVNEKEELINSDQDALLSPQRASQILWRTGMLCEPIPDGFYSVIPDKRLKEQFHNIPSLDELRALEAEGYKNDVILVETEKDKKLSMLKQLILTLVKGLSSNPAAIIKKIAGLVSDFYKRPILESPAKAAVEETSHLFEDRGIQLLGQIKFGSCRPRAILFKSLADTVGLESRLMVGLPNEGAIGCVDSYKHMSVTVVLNSVELVVDLMRFPGQLLPRSTKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGFSERVDPDSVEKDESLQFHRKFDAASNAYGPKLRNWMLRSSTTLDSKLSLSHSEPNIANAFWRRSRRKDIAEQRTASSSPEHPSFRARGRSMLSGDRKVFRDFSDDVSTSRSDGASTSEARRIRRRSISITPEIGDDIVRTVRAMNETMKQNRLLRGQTDDRSFSHPSNERNSSSDVRRNDPLGSQRAISLPTSPHEYRGQTSDRSEHSAFANDDLASKWTKVLESFSMNDKPLLPYPEWNIDYSELTVGIRIGIGFFGEVFRGIWNGTDVAIKVFLEQDLTPENIEDFCNEISILSRLRHPNVLLFLGACTKPPRLSMVSEYMEMGSLYSLIHLSGQKKKLSWRRRLKMLRDICRGLMCIHRMKIAHRDLKSANCLVNKHWTVKICDFGLSRVLTEAPARGSPSAGTPEWMAPELFRNEPFTEKCDIFSLGVIMWELCTLSRPWEGVPQERVVYAVGTEGARLEIPEGPLGRLISDCWAEPNERPSCEEILSRLLDCEYSLS 796
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 453277 461635 - Carg13601-RA Car02g00070 142556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00070 796 Pfam Protein tyrosine and serine/threonine kinase 541 788 IPR001245 GO:0004672|GO:0006468
Car02g00070 796 MobiDBLite consensus disorder prediction 471 492 - -
Car02g00070 796 MobiDBLite consensus disorder prediction 442 502 - -
Car02g00070 796 Pfam Ethylene-responsive protein kinase Le-CTR1 59 254 - -
Car02g00070 796 MobiDBLite consensus disorder prediction 398 417 - -
Car02g00070 796 MobiDBLite consensus disorder prediction 447 470 - -
Car02g00070 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 659 671 IPR008271 GO:0004672|GO:0006468
Car02g00070 796 ProSiteProfiles Protein kinase domain profile. 540 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00070 796 MobiDBLite consensus disorder prediction 362 384 - -
Car02g00070 796 ProSitePatterns Protein kinases ATP-binding region signature. 546 567 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00070 Car20g00185 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00070 Car-Chr2:453277 Car09g00284 Car-Chr9:1532056 6.58E-77 dispersed
Car02g00070 Car-Chr2:453277 Car20g00185 Car-Chr20:1028580 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88625 PF07714 PK_Tyr_Ser-Thr 1.50E-58 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00070 - - csv:101220859 1471.83