Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00071 ATGGGGAGCAAGCAATTGGATTTAAATCAGCCGTTTCTGTCGGTGAGGCGTGTTTCATCGATCGAAACATCATCGAAAGCGAACGAGCTAGCGAGAACGGATAATCGCTGGCTGCATCTTCCTGTCTACAAGTCTGAATTGAAATCTGGGCCGGTATCGAATCCGGGGAGTGTTCCTTTTGTATGGGAGCATTCCCCAGGAAAGCCCAAGGATGGTAGAGAATCACAAACCATAGGTTTGATACCGCGTTCGGCTGCCCCGACACAACCTCCGGGGACGTCTTCAGATTCAAATCATCTTTGTAGCACAGGAGGAGGAGATGATTACCATTCTCATAAAAGCATTGTTAGATTTATGTCCTTGAGGGAGACGTTTGAGAGGGATTCAAGTTTTGATTCGGACAACGATGGTGACGGTGACAAGACTTATCTCGAAGCAAACGACACCCTTTCGAGATCTAAGTCGTTCTCGATGAACTGTAGTGAAACTGGTTCGAGTGGATTGGATGGTGGTGATGTTAAGCCATCAGGAACGTTCTTAAAAGATCAGCAAACTCATGAGCTCATGATGGGAAGATTCCTGCCTGCTGCCAAGGCATTGGCTTCAGAAACATCTCAAGTTGTTCATCATAGAAAGAAAAATGTTCAAAGAGTGCAGCAGAGAGAAGCAAGGAAAATTGTAGAAATCGATATCGAGCACGGAGTAAATTCGCTTCCAACGACGTTGCCATTGAATTACGCTCCTCCGAATACTCACGACGAAGAAGCTAGCAAAGATGAAGATATTGATCTTGATGAACCTGAATACTCAGCTACTAAAGCTCGTCGGTTCCTCGCTCGTTTTTGCTTGAGTGGTTCCTTTGGCCTTCGGCATCATCGAGTTCCCGGGATGAGAAGGCAACGCTCCGCAGCAGCTCGTGGAGTTCATTTGGATTCTTCTCCTCGACATGTCCAGCCTTCAAAGGTTGAAGGTGAGACCAAAAGCTTGAGCTCTACAAGTATGGAGTCTAGTGGTTCATGTTCGTCTTGTTCCGATGCAAACTCGAACCCGAATGCTACAGTATTAGGAAGCCTTCATCATGAAAAATCAAGTCAAGAAGCAATCTCAGATGATTCTTCTCAGGACTTTGTGTCGTTCACAAGTTCAGAAGCTTCTAACAAAGTGCCAAAGGGATCACATGTTGAACAGAACACTAAAGGCCATAACCATTGTCATGAAGCCTCGGCTCGGGGAAGAACCGATCTCGAAAGCGCTCGTTGCAGAAAAAATTCTGTGCCCATTTCTTCACAACGTGAGCTTTCTCCTCCTCTACCGAGATCCCCATCGGAGTCTTGGCTTAAGCGCACGTTGTCCACCATTGTCTTGAAACTCGACTCGACATGA 1383 46.35 MGSKQLDLNQPFLSVRRVSSIETSSKANELARTDNRWLHLPVYKSELKSGPVSNPGSVPFVWEHSPGKPKDGRESQTIGLIPRSAAPTQPPGTSSDSNHLCSTGGGDDYHSHKSIVRFMSLRETFERDSSFDSDNDGDGDKTYLEANDTLSRSKSFSMNCSETGSSGLDGGDVKPSGTFLKDQQTHELMMGRFLPAAKALASETSQVVHHRKKNVQRVQQREARKIVEIDIEHGVNSLPTTLPLNYAPPNTHDEEASKDEDIDLDEPEYSATKARRFLARFCLSGSFGLRHHRVPGMRRQRSAAARGVHLDSSPRHVQPSKVEGETKSLSSTSMESSGSCSSCSDANSNPNATVLGSLHHEKSSQEAISDDSSQDFVSFTSSEASNKVPKGSHVEQNTKGHNHCHEASARGRTDLESARCRKNSVPISSQRELSPPLPRSPSESWLKRTLSTIVLKLDST 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 464718 466100 + Carg13600-RA Car02g00071 142557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00071 460 MobiDBLite consensus disorder prediction 360 444 - -
Car02g00071 460 MobiDBLite consensus disorder prediction 422 437 - -
Car02g00071 460 MobiDBLite consensus disorder prediction 155 174 - -
Car02g00071 460 MobiDBLite consensus disorder prediction 369 393 - -
Car02g00071 460 MobiDBLite consensus disorder prediction 81 104 - -
Car02g00071 460 MobiDBLite consensus disorder prediction 46 106 - -
Car02g00071 460 MobiDBLite consensus disorder prediction 293 346 - -
Car02g00071 460 Pfam Protein of unknown function (DUF688) 1 374 IPR007789 -
Car02g00071 460 MobiDBLite consensus disorder prediction 323 346 - -
Car02g00071 460 MobiDBLite consensus disorder prediction 394 419 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00071 Car19g00804 CCT
Car02g00071 Car11g01493 CCT
Car02g00071 Car11g01493 ECH
Car02g00071 Car19g00804 ECH
Car02g00071 Car20g00184 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00071 Car-Chr2:464718 Car11g01580 Car-Chr11:12543503 2.68E-45 dispersed
Car19g00804 Car-Chr19:8680649 Car02g00071 Car-Chr2:464718 1.73E-60 wgd
Car02g00071 Car-Chr2:464718 Car20g00184 Car-Chr20:1021904 3.08E-33 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00071 - - cmos:111451153 853.203