Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00082 ATGGCGGATTTGGAAGAGAAAGAAGGAAGAAGAAGAAGCAGAGAGCGTGGGGCTAGTGTTCTAGCGGATGAGTGTAGTGACCAGGAATATGATATCTCCATAAGAGCTTATTCCGCCAGGAATCATCTCTCTGAATTGAAAATTTCAGGAGCTGGCTCTCTGAAACTGGAGAAGAATTGGGAAAATGATAGACTGGATTGTGGTGATGTTAAAGTAAATGGTGAAGTTCCTGAGATCCCTGATGCTACCATTGTCAATCATCCATGTATGGGAAAGATTCCAAAGGTTATTGAGGCCGAGCAGGTCGCTGCCGGGTGGCCGAGTTGGCTGGCTATGGCAGCTGGTGAGGCTATCAAAGACTGGTTGCCAAAACGTGCAAGTAACTTCATCAAGCTAGAGAAAATTGGGCAGGGAACTTATAGCAGTGTGTATAAAGCTCGTGATATCGTTCGAGATAAAGTTGTGGCGTTGAAAAGGGTCACGTTCGACAATCAAGATACTGAGAGTATCAAGTTTATGGCAAGGGAAATCCTTGTTTTGCGAAGGCTTGATCATCCAAATATAGTTAAGTTGGAAGGTTTGATCATATCACAAGCATCATGTACCATGTATCTTGTTTTTGAATATATGGAACATGATCTTACTGGACTTGCATCACGCCCTGGCACGTCGTTCACCGAACCACAGATGAAGTGTTACATGAAGCAACTTTTGAGTGGACTTGATCACTGTCACAGCAATGGGGTTTTGCATCGAGACATAAAGGGCTCGAATCTTCTTATCGACAACAATGGCGTTTTGAAGATAGCGGATTTCGGGTTGTCAGTTTTCTTTGATTCACAGTCGACAGTTCCCATGACAAGTCGTGTAGTAACTCTCTGGTATCGACCACCGGAGCTTCTACTCGGAGCATCTCAATATGGAGCTGAAGTTGATTTATGGAGTGCTGGTTGCATTCTAGGAGAGTTATATACCGGCAAGCCTATCTTGCCAGGAAAAACAGAGGTTGAACAACTACACAAGATATTTAAGCTATGTGGTTCCCCCTCCAAGGAATATTGGAACAATTCGCACTTGAAGCATTCAGCAAGCATGAAGCCTCCACAGGCGTACGAAAGATGTCTTCGAGAACGATATAACGATTTGCCTCGTGCTGCTGTTGAGCTTATGGACACTTTGCTGTCTATCGATCCTGCAGGGCGAGGAACTGCGGCGTCTGCACTCAACAGTGAGTTCTTTACCACGAGGCCATTACCATGCGATCCTTCAAGTTTGCCAAAATACCCTCCCAGCAAAGAGATCGACTCGAAAATGCGCGAAGAGGAAGCAAGGAGGCAACGAGGAGTAGTCGGTGGAAAAAACCGAACAATTGACTCGGAAACAAAAGGACTGAAGCAATCACGGGTAGTTCCTTCAGCTAAGGCGAACGCTGAGTTGGTTATGTCACTATTGAGAAAACAAAGTCGTTCGAGCTCGATGTGTTCTTACAGTTTGGTGTCCAAGAGAACCTCAAATTCCGGACCTATAACTCAGGGACCAAGATTTCCAAACTCCAAAAGGGAGAAACATGTTTCTTCGATTCCGAGCGAGTATCTAACGTCGTCTGAAGGAAAGCGAGTTCCAAAGCCAGAATCGTCGAGTCAAGACAAAAGCTCTGCAGACGAGCTCATGAAAAAGCTGCACAGAGACCAACTTGGCTCTTGTAAGTTGGAACATTCGAAAGCATCAGCTCTGATAGTTAGCTAA 1746 45.13 MADLEEKEGRRRSRERGASVLADECSDQEYDISIRAYSARNHLSELKISGAGSLKLEKNWENDRLDCGDVKVNGEVPEIPDATIVNHPCMGKIPKVIEAEQVAAGWPSWLAMAAGEAIKDWLPKRASNFIKLEKIGQGTYSSVYKARDIVRDKVVALKRVTFDNQDTESIKFMAREILVLRRLDHPNIVKLEGLIISQASCTMYLVFEYMEHDLTGLASRPGTSFTEPQMKCYMKQLLSGLDHCHSNGVLHRDIKGSNLLIDNNGVLKIADFGLSVFFDSQSTVPMTSRVVTLWYRPPELLLGASQYGAEVDLWSAGCILGELYTGKPILPGKTEVEQLHKIFKLCGSPSKEYWNNSHLKHSASMKPPQAYERCLRERYNDLPRAAVELMDTLLSIDPAGRGTAASALNSEFFTTRPLPCDPSSLPKYPPSKEIDSKMREEEARRQRGVVGGKNRTIDSETKGLKQSRVVPSAKANAELVMSLLRKQSRSSSMCSYSLVSKRTSNSGPITQGPRFPNSKREKHVSSIPSEYLTSSEGKRVPKPESSSQDKSSADELMKKLHRDQLGSCKLEHSKASALIVS 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 545090 548116 - Carg13589-RA Car02g00082 142568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00082 581 MobiDBLite consensus disorder prediction 420 469 - -
Car02g00082 581 Pfam Protein kinase domain 130 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00082 581 MobiDBLite consensus disorder prediction 432 451 - -
Car02g00082 581 MobiDBLite consensus disorder prediction 495 513 - -
Car02g00082 581 ProSitePatterns Protein kinases ATP-binding region signature. 135 158 IPR017441 GO:0005524
Car02g00082 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Car02g00082 581 ProSiteProfiles Protein kinase domain profile. 129 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00082 581 MobiDBLite consensus disorder prediction 495 567 - -
Car02g00082 581 MobiDBLite consensus disorder prediction 542 567 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00082 Car11g01570 CCT
Car02g00082 Car19g00784 CCT
Car02g00082 Car11g01570 ECH
Car02g00082 Car19g00784 ECH
Car02g00082 Car20g00175 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00082 Car-Chr2:545090 Car04g00518 Car-Chr4:2917917 0 dispersed
Car13g00928 Car-Chr13:9527951 Car02g00082 Car-Chr2:545090 8.70E-73 dispersed
Car02g00082 Car-Chr2:545090 Car20g00175 Car-Chr20:952919 2.45E-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88627 PF00069 Pkinase 3.70E-69 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00082 - - bhj:120088593 853.973