Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00099 ATGGGGATCTGTTTGTCTACTGGCAATCAGTGTAGCTGCAATGGGGGAGCCAATGGAGAGAGGATTTCTGGATCCTGTTTGGGGATTAGAGTTTCTGGCCGGATTGAAAGAAAAAGAACATTTTCAGATCATACTTTTTCCATACAGCATTTGAATTCTATACCGAATAGGCTTGTTTATAACGGGAAGACTCGAAATTCTTGCATTTTCACTCAGCAGGGTCGCAAGGGGATAAATCAGGATGCCATGGTCGTGTGGGAAGACTTCATATCAGATGGTGCAATTTTTTGTGGGGTATTTGATGGTCACGGCCCTCATGGTCATGTCGTTGCACGAAAGGTTAGAGATGTTCTTCCAAGAAAGCTGGAGTCATCCTGGGAGTCATCTCAGTTAAAGCATAATAGATCAGATAGAACCTCTTGTTTCCGTTGGAGTCAGAAAAATTCAGCAGATGGTGAACGACACGACATGGATGGTTCGCAGGAGGATAAATCAAGTTCTTTATGGAGAAAAGCTTTTCTCAAATCATATAAAGCCATGGATAAGGAGCTCAAATCTCATCCCAAAGTGGACTGTTTCTGCAGTGGTTGTACTGCGGTCACTTTGGTTAAGCAGGGTTCCGATCTATTCGTGGGAAGTATCGGGGATTCTCGAGCAATTCTCGGATCGAAAGATAGCAGTGATTCGCCTGTAGCAACCCAATTGACAGTAGATCTAAAGCCTGATTTACCCAGTACGTCCAGTCCATTACGTTACTTTTACGAACTAATACGAGAAGCTGAAAGGATAAAGAAGTGTAAAGGAAGGGTGTTTGCATTGCAAGATGAGCCAGAAGTGCCAAGAGTGTGGCTGCCATTCGACAATGCACCTGGCCTAGCCATGGCTCGAGCGTTTGGCGACTTCTGTTTGAAGGACTATGGAGTTATCTCTATTCCCGAATTTTCACACCGTGTACTTACAGATAACGATCTGTTTGTTGTCCTTGCTTCAGATGGGGTTTGGGACGTATTGAGCAACCAAGAGGTGGTTGAGATAGTTCATTCTGCCCCAACTCGCTCATCGGCAGCTCGGATGGTGGTAGACTCGGCTGCTCGTGAATGGAAGCTCAAGTACCCTACTTCAAAAATGGACGACTGTGCAGTCGTTTGCTTATTCTTGGACGGGAAAATGGATTCAAATTCAGAAAATGAAGAACGATCTCTTGCAACTCTTCAAACCGATGAAATGGATAACACGGAAAATTCAGATGAAGAGCAGAGGTTGGAGCCAAGTTTACAGAGGAACAATACGGTCCGATCGTCGGAAGAAAAAGAGCAAATCGGAGGGCGATGTTCACAAAGCGAAGAGAATGGAGAATCAATCTGTGCTAAAGATGAGAATTGGTTAGGATTGGAGGGTGTAACAAGAGTAAACTCCCTGATTCAACTTCCTAGATTTTCTTGTACTAAGAACATAGTTGAAGAAGGTTGTAATGGCGGATGA 1482 44.2 MGICLSTGNQCSCNGGANGERISGSCLGIRVSGRIERKRTFSDHTFSIQHLNSIPNRLVYNGKTRNSCIFTQQGRKGINQDAMVVWEDFISDGAIFCGVFDGHGPHGHVVARKVRDVLPRKLESSWESSQLKHNRSDRTSCFRWSQKNSADGERHDMDGSQEDKSSSLWRKAFLKSYKAMDKELKSHPKVDCFCSGCTAVTLVKQGSDLFVGSIGDSRAILGSKDSSDSPVATQLTVDLKPDLPSTSSPLRYFYELIREAERIKKCKGRVFALQDEPEVPRVWLPFDNAPGLAMARAFGDFCLKDYGVISIPEFSHRVLTDNDLFVVLASDGVWDVLSNQEVVEIVHSAPTRSSAARMVVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSNSENEERSLATLQTDEMDNTENSDEEQRLEPSLQRNNTVRSSEEKEQIGGRCSQSEENGESICAKDENWLGLEGVTRVNSLIQLPRFSCTKNIVEEGCNGG 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 637029 639211 + Carg13572-RA Car02g00099 142585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00099 493 Pfam Protein phosphatase 2C 152 363 IPR001932 -
Car02g00099 493 MobiDBLite consensus disorder prediction 395 451 - -
Car02g00099 493 ProSiteProfiles PPM-type phosphatase domain profile. 66 386 IPR001932 -
Car02g00099 493 MobiDBLite consensus disorder prediction 142 163 - -
Car02g00099 493 MobiDBLite consensus disorder prediction 148 163 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00099 Car11g01556 CCT
Car02g00099 Car19g00768 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00099 Car-Chr2:637029 Car16g00965 Car-Chr16:8036771 8.17E-145 dispersed
Car11g01556 Car-Chr11:12414585 Car02g00099 Car-Chr2:637029 0 wgd
Car19g00768 Car-Chr19:8444350 Car02g00099 Car-Chr2:637029 0 wgd
Car02g00099 Car-Chr2:637029 Car20g00496 Car-Chr20:2748724 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00099 - - cmax:111469610 950.273