Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00106 AACAGAGCCTCTAAGGCTTATCACGACCATCCCAACATCTCCAAGCTCCTCCTCGTCTTGGCCGCCAGTGGAGGCGGGCTGGTGGCAAGTACTAATGGCAAATCTCTGTACCCTTCTGCATTTGCTGATGCCGTCCAACAAGATGATGATTGGAGGAAGAAGAAGAAGAAGAAGAAGGTGGTGGTGCTTGGAACAGGATGGGCCGGCACCAGCTTCTTGAAGAATCTCAAGAGCTCCTCTTATGATGTTCATGTCATATCCCCTCATAATTACTTCGCTTTCACCCCTTTGCTTCCTAGTGTCACTTGTGGCACCGTCGAGGCACGCAGCATTGTCGAACCAATTCGTAGCATCACCAAGAAGAAAGGATTGAGCATTGAATTTAGGGAAGCTGAGTGTTATAAGATAGATGCAGAGAACAAGAAGGTGTTCTGTCGATCAACTCAAGACACGAACTTGGGTGGCAAGGAAGAGTTTTCAGTGGACTACGACTATCTGATAGTAGCCATGGGAGCTAAATCCAACACTTTCAACACACCAGGAGTAGAGGAAAATGCTCATTTCTTGAAGGGAGTGGAAGATGCTCAGCGGATTCGTCAGTCGGTAATCGATTGTTTCGAGCGAGCCAGCCTTCCAAATCTAAGTGAAGAAGAGAAGAAGAGAACCCTTCACTTTGTTATAGTTGGAGGAGGTCCAACAGGAGTGGAATTTGCAGCAGAACTTCATGACTTTGCTGCAGAGGATTTAGCAGAGTTGTATCCTTCATTGAAAGAATACGTGAAAATCACCCTCTTAGAGGCAGGCGATCATATTTTGAACATGTTTGACAAGAGGATTACAGCCTTTGCTGAAGACAAGTTTCAAAGAGATGGGATTAACTTAAAAACTGGTTCAATGGTTGTGAAAGTAACTGATAAGGAAATCTCCACAAAAGAAAGGGCAACCGGTGAGTTTGTGTCTGTTCCTTATGGAATGGTTGTCTGGTCCACCGGCATCGGTCCTCGGCCTCAAGTCGTTGACTTCATGAAGCAGATCGGTCAGACTAACAGACGTGCTTTGGCTACTGATGAATGGCTAAGGGTTGAAGGATGTGATGGTGTCTATGCTTTTGGTGATTGTGCCACAATAAACCAAAGAAAAGTCATGGAAGATATTGCTGTGATATTCAGCAAGGCGGACACAGACAATTCAGGAAGTTTAGCCCTGCAAGAGTTTCAAGAAGCAGTAAAGGATATTTGTGAGAGATACCCTCAAGTAGAGATCTATCTGAAGAAGAATAAGATGAAGAACTTTGCAGCCTTGTTGAAGAAGTCGCAATCGGACATGCAGAAACAGTCGACCGAGCTCGATATCGAAAGCTTTACGTCTTTACTTTCCGAAGTCGATGCTCAGATGAAGAATCTGCCTGCTACTGCTCAAGTTGCTGCTCAACAAGGTGAGTATCTTGCAACCTGCTTCAACAAGATGGAACAATGTGAGAAGTACCCGGAAGGCCCTCTCCGATATAGAGGGACGGGGCGACATCGGTTTCGTCCCTTTAGGTACAAGCATTTTGGGCAGTTTGCTCCTCTTGGTGGAGAACAAACAGCAGCTCAACTACCTGGAGATTGGATCTCAATAGGTCATAGCAGCCAGTGGCTTTGGTACTCTGTGTATACAAGCAAGCTAGTAAGCTGGCGCACGAGGGTTCTGGTCCTATCAGACTGGGGTAGAAGATTCATATTTGGCAGGGATTCAAGCAGAATCTGA 1749 45.85 NRASKAYHDHPNISKLLLVLAASGGGLVASTNGKSLYPSAFADAVQQDDDWRKKKKKKKVVVLGTGWAGTSFLKNLKSSSYDVHVISPHNYFAFTPLLPSVTCGTVEARSIVEPIRSITKKKGLSIEFREAECYKIDAENKKVFCRSTQDTNLGGKEEFSVDYDYLIVAMGAKSNTFNTPGVEENAHFLKGVEDAQRIRQSVIDCFERASLPNLSEEEKKRTLHFVIVGGGPTGVEFAAELHDFAAEDLAELYPSLKEYVKITLLEAGDHILNMFDKRITAFAEDKFQRDGINLKTGSMVVKVTDKEISTKERATGEFVSVPYGMVVWSTGIGPRPQVVDFMKQIGQTNRRALATDEWLRVEGCDGVYAFGDCATINQRKVMEDIAVIFSKADTDNSGSLALQEFQEAVKDICERYPQVEIYLKKNKMKNFAALLKKSQSDMQKQSTELDIESFTSLLSEVDAQMKNLPATAQVAAQQGEYLATCFNKMEQCEKYPEGPLRYRGTGRHRFRPFRYKHFGQFAPLGGEQTAAQLPGDWISIGHSSQWLWYSVYTSKLVSWRTRVLVLSDWGRRFIFGRDSSRI 582
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 670617 673692 + Carg13564-RA Car02g00106 142592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00106 582 ProSitePatterns EF-hand calcium-binding domain. 393 405 IPR018247 -
Car02g00106 582 Pfam Pyridine nucleotide-disulphide oxidoreductase 58 383 IPR023753 GO:0016491
Car02g00106 582 ProSiteProfiles EF-hand calcium-binding domain profile. 380 415 IPR002048 GO:0005509
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00106 Car19g00757 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00106 Car-Chr2:670617 Car20g00299 Car-Chr20:1732255 2.70E-14 dispersed
Car13g00556 Car-Chr13:7452810 Car02g00106 Car-Chr2:670617 0 wgd
Car19g00757 Car-Chr19:8389832 Car02g00106 Car-Chr2:670617 0 wgd
Car02g00106 Car-Chr2:670617 Car03g00429 Car-Chr3:4852125 4.16E-12 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00106 K03885 - csv:101209855 1053.51