Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00125 ATGGACTACTCTGCAGGAAACTGGAATTGGCTCTTCGATTACTCTACAATGGATGATCTCGCCGTCGCCGCCGCCGCCGCCGGCAACTTCTCCCCTCCACAGTCGGTTGGTTTCAGCTGGTCCAATCCCTCCATCAACTTTTCATCTAAAGACAGCTTGGAGGTAGACTGCTCATATGGAGATCTGGACGGCTTACAGGAAGTGGGTCGAAAACGGCCAAAGACTGAAACAGGTGCTGTTGCATCTTCCGCCAAAGCTTGCAGAGAGAAATTGAGAAGAGATAAGCTGAATGAGAGTTTCTTGGAATTGGCTGCTGTCCTTGAACCTGGAAAACCACCAAAAACAGACAAGGTTGCAATCTTGAGCGATGCCATCAGGATGGTGACTGATTTACAAACTGAAACCCAGAAGCTGAAACAATCTAAGGAGGATTTGAAGGCAAAAATCAAAGAATTAAAGGTTGAGAAAAATGAACTTCGTGATGAGAAGCAAAGGTTGAGAGCAGAGAAAGAAAAGTTGGAGCTGCAAATCAAAGGGGTAAATACTCGAGCAGCTGACATCCACCGTCGTCCTCCTACACTGTCACCTGCTTTTACAGCACAAGGCCAAGCTGCTGGTAACAAGCTGATGCCTTTCATTGGTTATCCTGGCATTGCCATGTGGCAATTCCTGCCACCTGCAGCCGTCGACATATCTCAGGATCATGTGCTCCGCCCACCTGTTGCTTAA 729 47.87 MDYSAGNWNWLFDYSTMDDLAVAAAAAGNFSPPQSVGFSWSNPSINFSSKDSLEVDCSYGDLDGLQEVGRKRPKTETGAVASSAKACREKLRRDKLNESFLELAAVLEPGKPPKTDKVAILSDAIRMVTDLQTETQKLKQSKEDLKAKIKELKVEKNELRDEKQRLRAEKEKLELQIKGVNTRAADIHRRPPTLSPAFTAQGQAAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPPVA 242
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 743743 747118 + Carg13545-RA Car02g00125 142611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00125 242 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 80 131 IPR011598 GO:0046983
Car02g00125 242 Coils Coil 128 183 - -
Car02g00125 242 Pfam Helix-loop-helix DNA-binding domain 83 132 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00125 Car20g00518 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00125 Car-Chr2:743743 Car16g00858 Car-Chr16:6308245 4.38E-95 dispersed
Car13g00572 Car-Chr13:7589930 Car02g00125 Car-Chr2:743743 5.10E-62 wgd
Car16g00564 Car-Chr16:3571548 Car02g00125 Car-Chr2:743743 7.78E-45 wgd
Car02g00125 Car-Chr2:743743 Car20g00518 Car-Chr20:2857941 1.73E-140 wgd
Car02g00125 Car-Chr2:743743 Car09g00840 Car-Chr9:5125159 1.67E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2937 PF00010 HLH 3.20E-09 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00125 - - cpep:111794592 467.233