Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00129 ATGAATCATAAATGTCCGCTCTGTCAGGCCTATGGATGGAACTGCGACCTTTGTTCCTCCATGGGTCCCCCTATTCAGGATCTTCCTTCCTACTCTCCTTGCCCTTCCATCCCTGAGTTTTCACGAATTTGGTCTTCCGTTCTCGACGTCTCTTCCGATGCTCCTTCTCACTGGCCCACCCCCTCCTCCATCAATACCGATTCCATTTCTTTCTCCGATGTTGATTCTCCTCAATTGCTCTCTGCTAAGTTCAATGACTGCTCTAAGTTTGACCCCTGGATCGCTGCTCCTGCTTCTTCCTTCACTCTGAATCCTTCTTATCACTTGCCTTTGTCCAGACCTCAACCCTCATTTCTCTCCGACGACTCCAATCTTCCCAAGGGTTGTTCTGATTTGAAGGATGTTGAAACTCATGAGAACAATGATATTTGCGAGGGTCTCAATCTTGGCGATGCTTCACTCAACTTGGAAACTGAGGAAGAGCTGTTTGGCTGTTCGCAAGGTACGATGAAATGCCATTTTGGAGCTGGAGAATTGGAATGTTTTCTAATGGGGAAAAACGTGTCTACTGAATCTAATGGCCCTGTTGAGAATACTGTTGAGAATCCTGTTGAGGATTCATTATCTGGGCAACAAGATTTTTTGGGATTTCAATCATCTCAAGTCGGTCTTTCCATGAACACGATTCAAAATGGGAATTCAAATTGTATGGTTATGAATCCTAGTTGCAATGGAAACCTCAACATTGGATTTCCTACTACTGCTCAGGTTCATTCAACCATATCACTTTCACTCTCAAATATCACTGGCGAAAGCAGTGGTACAGATTATCAAGACTGCGGTTTATCACCGGGGTTTTTGGGAGAAACGTCATGGGACCCTAGCATGGAAGCTATTGTTCCACAAGTGAAGGATCGAAACAGGGATAAAGCCAAGATGAGATACAATGAAAAGAAGAAAACAAGAACATTTGGAAAGCAAATACGATACGCATCTCGCAAAGCCAGAGCTGATACTAGAAAAAGGGTTAAAGGCCGATTCGTGAAAGCAGGGGAAGCCTATGACTACGATCCTCTCGTGACAAGAAACTTCGAGCCATGA 1101 44.41 MNHKCPLCQAYGWNCDLCSSMGPPIQDLPSYSPCPSIPEFSRIWSSVLDVSSDAPSHWPTPSSINTDSISFSDVDSPQLLSAKFNDCSKFDPWIAAPASSFTLNPSYHLPLSRPQPSFLSDDSNLPKGCSDLKDVETHENNDICEGLNLGDASLNLETEEELFGCSQGTMKCHFGAGELECFLMGKNVSTESNGPVENTVENPVEDSLSGQQDFLGFQSSQVGLSMNTIQNGNSNCMVMNPSCNGNLNIGFPTTAQVHSTISLSLSNITGESSGTDYQDCGLSPGFLGETSWDPSMEAIVPQVKDRNRDKAKMRYNEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKAGEAYDYDPLVTRNFEP 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 755014 756696 - Carg13541-RA Car02g00129 142615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00129 366 Pfam CCT motif 308 350 IPR010402 GO:0005515
Car02g00129 366 ProSiteProfiles CCT domain profile. 308 350 IPR010402 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00129 Car20g00602 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00129 Car-Chr2:755014 Car07g00641 Car-Chr7:3251437 3.76E-35 dispersed
Car02g00129 Car-Chr2:755014 Car20g00520 Car-Chr20:2865389 5.55E-142 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2938 PF06203 CCT 1.10E-16 CL0281 Car TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00129 - - cmax:111469877 759.214