Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00133 ATGGCTTTTATGGCTCTTAGAAGGAAGTTGGGTGAGAATGTTGTGCAGGAATTCATGCTTCAGCGATGCTATAGCTCTAAAGTCGACCTTAAGAAGCTCCGTCCAATGATTTTGAAGAGACTTCAAAATCGGGCCAATAACTATCCTATTAAGGGTATGATTCCAGTGGCACAGGAAGTCCTTGAAGCTAGGGCAATGCTTATTCATGGAGTTTCCACTCTTCTCAAAACTTTTCCGGTTCTCTCTTGCAAATTTTGTCCAGAAGTATATGTTGGTGACAAAGGTCATCTAATACGAAGTTGCGGCGGTTACAAACATGGTGCAAAGAATCGAGTTCATGAATGGATCAGAGGTGATTTGAATCATATCCTTGTCCCTGTAGAATCGTTTCACCTCCATCACATGTTCCAAGATGTTATTAAACACGATGAGAGGTTCGACTTCAAACGTGTTCCAGCAGTCGTTGAGCTATGCTGGCAAGCTGGAGCCAATCCAAATGATGAGCATCTGTCTTCAAGCACTTGGAATTCAGATGGCGATGGCAGGGACGAACATTTGTCGAGTCATGAACTGATGGTTTTAGCAAGTACAACTATCAGGGCATGGGAAACAGTTAGAACCGGCGTGCAGAAACTGTTAATGGTATATCCTACTAAGGTTTGTAAACACTGCTCAGAAGTTCATGTTGGGCCATCAGGACACAAGGCTAGACTTTGTGGAGTATTTAAATATGAGAGTTGGCGAGGATCCCACTTCTGGGAGAAGGCAGACGTAGATGATTTAGTTCCTCCAAAGAGCATATGGCATCGGCGAGCACAAGATCCTCCCGTGCTCGTCGATGAAGGGAGGCATTACTATGGACACGCACCAGCAGTGCTCGCTCTTTGCTTACAGGCTGGTGCCATTGCACCCTCTAAGTATCATTGTATGATGAAAGTTCAAGGCTTATCACATCATAGTCAACTCAAGTGGAGCTTGCCCAATTCAGGACCTTCAGCCTCTTCCCTCTGTTATGGAATGCCAAGTAAACAGGTTGAAGACATACTAACAGAAGTAAATTCTGAGAATGAAAATGGGGCAGCTTACCTCTTTGTTTGTCTGATAGGCCTCATAGGCTCCACTCAAGCTCAGTTGCAGCTTGGTTTCTATGCCAATAGCTGCCCAAACGCTGAGAAGATTGTGCTGGACTTTGTTCATCAGCATATCCATAATGCTCCTTCACTGGCGGCAACATTCATTAGAATGCACTTCCATGATTGCTTCGTCAGGGGAGGTCCTTACTGGGAAGTTCCAACAGGGCGAAGGGATGGAGTGATCTCAAGGTCATCAGAAGCCACAGCCAACATTCCTCCACCATCTTCAAATTTCTCAAGACTCCAAACCCTTTTCGGAAACCAAGGCCTTGATGTTAAGGACTTAGTATTACTATCTGGCGCACACACAATCGGCATAGCCCATTGCTCATCATTCCGCAACCGACTCTACAACTTCACCGGCGTCGGTGACCAAGACCCCTCCCTGGACCCAAGATACGCCGCTAATCTCAAGGCCAACAAATGCAAAACTCCCACCGACAACAGCAAAGTGGAAATGGACCCAGGGAGTCGTAAAACATTTGACCTTAGCTACTACTCTCTTCTTCTCAAACGAAGGGGCCTTTTCCAATCCGACTCTGCTCTCACTAAAGACGCAACTTCATTGGGTCTAGTTCAGAAACTTGTCGAAGGACCCATTGAAGAGTTCTTCGCTGAATTTGCTGCAGCCATGGAGAAAATGGGTCGGATTAACGTGAAGACTGGTACTGAAGGCGAAATCAGAAAGCGATGCGGCGTGGTGAATAGTTAA 1845 45.91 MAFMALRRKLGENVVQEFMLQRCYSSKVDLKKLRPMILKRLQNRANNYPIKGMIPVAQEVLEARAMLIHGVSTLLKTFPVLSCKFCPEVYVGDKGHLIRSCGGYKHGAKNRVHEWIRGDLNHILVPVESFHLHHMFQDVIKHDERFDFKRVPAVVELCWQAGANPNDEHLSSSTWNSDGDGRDEHLSSHELMVLASTTIRAWETVRTGVQKLLMVYPTKVCKHCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKADVDDLVPPKSIWHRRAQDPPVLVDEGRHYYGHAPAVLALCLQAGAIAPSKYHCMMKVQGLSHHSQLKWSLPNSGPSASSLCYGMPSKQVEDILTEVNSENENGAAYLFVCLIGLIGSTQAQLQLGFYANSCPNAEKIVLDFVHQHIHNAPSLAATFIRMHFHDCFVRGGPYWEVPTGRRDGVISRSSEATANIPPPSSNFSRLQTLFGNQGLDVKDLVLLSGAHTIGIAHCSSFRNRLYNFTGVGDQDPSLDPRYAANLKANKCKTPTDNSKVEMDPGSRKTFDLSYYSLLLKRRGLFQSDSALTKDATSLGLVQKLVEGPIEEFFAEFAAAMEKMGRINVKTGTEGEIRKRCGVVNS 614
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 772945 779219 - Carg13537-RA Car02g00133 142619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00133 614 Pfam Peroxidase 424 573 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car02g00133 614 ProSitePatterns Peroxidases active site signature. 409 420 IPR019794 GO:0004601
Car02g00133 614 ProSitePatterns Peroxidases proximal heme-ligand signature. 472 482 IPR019793 -
Car02g00133 614 ProSiteProfiles APO domain profile. 82 167 IPR023342 GO:0003723
Car02g00133 614 ProSiteProfiles Plant heme peroxidase family profile. 377 613 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car02g00133 614 Pfam APO RNA-binding 188 301 IPR023342 GO:0003723
Car02g00133 614 Pfam APO RNA-binding 26 164 IPR023342 GO:0003723
Car02g00133 614 ProSiteProfiles APO domain profile. 220 305 IPR023342 GO:0003723
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00133 Car20g00523 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00133 Car-Chr2:772945 Car08g01073 Car-Chr8:7309057 2.51E-60 dispersed
Car05g01045 Car-Chr5:9945472 Car02g00133 Car-Chr2:772945 1.34E-15 transposed
Car09g00629 Car-Chr9:3643549 Car02g00133 Car-Chr2:772945 2.61E-64 transposed
Car10g00429 Car-Chr10:2134353 Car02g00133 Car-Chr2:772945 9.94E-66 transposed
Car11g00012 Car-Chr11:53243 Car02g00133 Car-Chr2:772945 4.91E-13 transposed
Car20g00523 Car-Chr20:2885267 Car02g00133 Car-Chr2:772945 0 transposed
Car11g01524 Car-Chr11:12264702 Car02g00133 Car-Chr2:772945 8.22E-08 wgd
Car02g00133 Car-Chr2:772945 Car20g00522 Car-Chr20:2881603 5.87E-135 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00133 - - csv:101213873 565.074