Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00137 ATGTTCCAGCCAAGTATTTTTGACGACGGTAAGCTCCTCCCCTTAGACATGCCTCAAAACACTTCCGATAGCGATTTTGCTCGAATCCGAGACGATGATTTCGATAGCGCTACTAAATCTGGTAGCGACAACAATCATGAACTTGCATCGGGTGACGATCAAGACCCTCGTCCTAAAAAGAAGCGTTATCATCGTCATACTCAACATCAGATCCAAGAAATGGAAGCTTTTTTCAAGGAGTGTCCTCACCCTGATGACAAACAAAGGAAGGAATTAAGCAGGGAATTAGGGTTGGAGCCTTTGCAAGTCAAGTTTTGGTTCCAAAATAAACGTACTCAAATGAAGAATCAACATGAACGCCATGAGAACACCCAACTTCGAACCGAAAACGAGAAGCTTCGAGCTGATAACATGAGATATAGAGAAGCTCTTAGCAATGCCTCGTGCCCTAATTGCGGTGGCCCGACTGCCATTGGTGAAATGTCCTTTGATGAACATCATCTTCGACTCGAAAATGCCCGTCTTCGCGAAGAGATCGATCGCATATCCGCAATAGCTGCAAAATATGTGGGGAAGCCAGTAGTGAACTACCCTCTACTTTCTCCACCAGTTCCATCTCGACCATTAGAGCTTGGAATGGGCAACTTTGGACCACAATCAGGCTTAGGAGGAGACATCTACGGTTCGGCTGGTGACCTAATCCGATCCATCAGTGCTCCAACCGAGGCGGACAAGCCGATGATCATCGAGCTAGCAGTTGCAGCCATGGAAGAGCTCACTAGAATGGCTCAACTAGGCGAGCCCTTATGGATGACTAGTCTAGATGGGTCCACTAATGTGCTCAATGAAGATGAGTACTTGAGAACGTTTCCTAGAGGCATTGGGCCTAAGCCATCTGGGTTTAAATGTGAAGCCTCACGTGAATCAGCTGTTGTTATCATGAACCATATTAACCTTGTTGAGATTCTCATGGACGTGAATCAATGGTCAACTTTATTCTCTGGAATTGTGTCAAGAGCTATGACACTTGAAGTGTTATCAACTGGAGTAGCTGGAAATTACAATGGAGCTTTACAAGTGATGACGTCGGAATTTCAAGTTCCGTCGCCATTAGTTCCAACTCGGGAGAGCTACTACGTTCGATATTGCAAACAACACGTGGACGGGACGTGGGCGGTGGTCGATGTTTCATTGGACGATCTTCGTCCTACTCCTGGATTAAGATGCCGACGAAGACCATCGGGTTGTTTGATCCAAGAAATGCCTAATGGTTATTCAAAGGTTACATGGGTTGAGCATGTTGAGGTTGATGACAGAGGAGTTCATAGTCTTTACAAGCAGCTGGTGAGCTCCGGCCAAGCCTTTGGGGCCAAGCGATGGGTTACAACCTTAGACCGCCAATGTGAACGGCTTGCCAGTGCCATGGCCACCAACATACCCACCGGTGATGTTGGAGTGATAACGAATCAAGAAGGGAGGAAGAGCATGCTGAAGCTGGCTGAGAGAATGGTGATAAGCTTCTGTGCTGGTGTGAGCGCCTCCACGACTCACACATGGACTACTTTGTCGGGTACGGGAGCCGATGACGTTCGAGTCATGACACGAAAGAGTATCGACGACCCCGGAAGACCTCCGGGTATTGTCCTAAGTGCTGCAACTTCCTTCTGGCTTCCCGTTCCACCTAAAAGAATCTTTGATTTTCTCCGTGACGAGAACTCTCGGAGCGAGTGGGATATTCTGTCGAATGGCGGAGTAGTTCAAGAAATGGCGCACATTGCCAATGGTCGCGACACGGGCAACTGCGTTTCTCTTCTACGTGTAAACAGTGCAAATTCAAGCCAAAGCAACATGCTAATCCTGCAAGAAAGCTGCACAGACCCAACAGCTTCATTCGTCATCTACGCTCCGGTCGACATCGTCGCAATGAACGTCGTCCTCAATGGTGGCGATCCCGACTACGTCGCGCTTCTCCCCTCCGGATTCGCCATTCTTCCAGACGGCACGGCAGAGACTGCCACCGGTGGTTCACTCCTGACGGTGGCATTTCAGATTCTGGTGGATTCGGTGCCAACAGCAAAACTGTCACTTGGGTCAGTTGCAACGGTGAACAATCTGATTGCTTGTACGGCGGAGAGGATTAAAGCTTCGTTGTCATGTGAGACAGCATAA 2169 48.5 MFQPSIFDDGKLLPLDMPQNTSDSDFARIRDDDFDSATKSGSDNNHELASGDDQDPRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELGMGNFGPQSGLGGDIYGSAGDLIRSISAPTEADKPMIIELAVAAMEELTRMAQLGEPLWMTSLDGSTNVLNEDEYLRTFPRGIGPKPSGFKCEASRESAVVIMNHINLVEILMDVNQWSTLFSGIVSRAMTLEVLSTGVAGNYNGALQVMTSEFQVPSPLVPTRESYYVRYCKQHVDGTWAVVDVSLDDLRPTPGLRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHSLYKQLVSSGQAFGAKRWVTTLDRQCERLASAMATNIPTGDVGVITNQEGRKSMLKLAERMVISFCAGVSASTTHTWTTLSGTGADDVRVMTRKSIDDPGRPPGIVLSAATSFWLPVPPKRIFDFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTAETATGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTAERIKASLSCETA 722
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 798512 803401 + Carg13533-RA Car02g00137 142623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00137 722 MobiDBLite consensus disorder prediction 25 59 - -
Car02g00137 722 Gene3D - 299 468 IPR023393 -
Car02g00137 722 ProSiteProfiles 'Homeobox' domain profile. 57 117 IPR001356 GO:0003677
Car02g00137 722 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 15 719 - -
Car02g00137 722 Gene3D - 46 134 - -
Car02g00137 722 SUPERFAMILY Bet v1-like 489 714 - -
Car02g00137 722 SMART HOX_1 58 121 IPR001356 GO:0003677
Car02g00137 722 ProSiteProfiles START domain profile. 241 473 IPR002913 GO:0008289
Car02g00137 722 ProSitePatterns 'Homeobox' domain signature. 92 115 IPR017970 GO:0000981|GO:0006355
Car02g00137 722 Pfam Homeodomain 60 116 IPR001356 GO:0003677
Car02g00137 722 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 15 719 IPR042160 -
Car02g00137 722 Coils Coil 111 143 - -
Car02g00137 722 CDD START_ArGLABRA2_like 245 469 - -
Car02g00137 722 MobiDBLite consensus disorder prediction 1 68 - -
Car02g00137 722 CDD homeodomain 60 118 IPR001356 GO:0003677
Car02g00137 722 SUPERFAMILY Bet v1-like 241 472 - -
Car02g00137 722 Pfam START domain 251 470 IPR002913 GO:0008289
Car02g00137 722 SMART START_1 250 470 IPR002913 GO:0008289
Car02g00137 722 SUPERFAMILY Homeodomain-like 48 117 IPR009057 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00137 Car11g01520 CCT
Car02g00137 Car19g00719 CCT
Car02g00137 Car19g00719 ECH
Car02g00137 Car11g01520 ECH
Car02g00137 Car20g00526 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00137 Car-Chr2:798512 Car17g00018 Car-Chr17:71992 0 dispersed
Car11g01520 Car-Chr11:12241544 Car02g00137 Car-Chr2:798512 0 wgd
Car13g00584 Car-Chr13:7664985 Car02g00137 Car-Chr2:798512 0 wgd
Car16g00556 Car-Chr16:3518734 Car02g00137 Car-Chr2:798512 1.72E-87 wgd
Car19g00719 Car-Chr19:8221874 Car02g00137 Car-Chr2:798512 0 wgd
Car02g00137 Car-Chr2:798512 Car20g00526 Car-Chr20:2899070 0 wgd
Car02g00137 Car-Chr2:798512 Car03g00472 Car-Chr3:5043138 0 wgd
Car02g00137 Car-Chr2:798512 Car07g00253 Car-Chr7:1378530 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2939 PF01852 START 2.10E-58 CL0209 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00137 K09338 - csv:101214763 1368.21