Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00191 ATGTTTTTTGTTGGTAAATATAAACTCCATCTCATTTCAAAGAACGGTATTTTCTTTGGCAGAATGCAGGTAGAAGTAAGCAAGTACACAGAAGGCAAAGTTGATAGAGCATTACGACCGAATGGGTTACCGAAGTCATTAATCCGCTATGATGCTCGCCAGAAGGAAAAGGCATTGGGTTCCATCACAGAGGTTGTTCAGACTGTGAAGAACCCTCGATCTAATAATCGAGCTATGAGTCACGACATTACCAGGAAAAAAGAAGAGTTGGAGAAGTTTAATTTTGACTCTGTTCTTCCCAAGTCAGTTGCAGCTGCAAATTATTCACCGGGTAGACAGACTCCTCAACAGGACCTCACAGATGATGGCTTAGGCAAGAAATCTAGGTTATCAAGTCGAGTTTCTTTAACAGGGCAAAAAGGGAAATCTCTTAGCAGTTCAAGAAATCTTGAAGTAACAGCCCTTGAACCAGAAATTTTGATGACCGATGAAATAGAACGGACTGATAGTTTGGACCGTGCTGAAAGAGAAAGGGATATTCGCCAAGGAATTGATTTAGCTACCACATTGGAGCGCATTGAGAAAAACTTCGTCATTTCTGATCCAAGGCTTCCTGATAATCCAATTATATTTGCATCCGACAGCTTTCTCGAGTTGACAGAATATACACGTGAAGAAATTTTGGGACGGAATTGCCGGTTTCTTCAAGGACCTGAAACAGATCAAGATACCGTCTCGAAGATTAGGGATGCAATTAGGGAACAAAGAGAAATAACTGTTCAGTTGATCAACTACACCAAGACGGGTAAAAAGTTCTGGAATTTATTCCACTTGCAACCGATGCGTGATGAAACGGGAGAGCTTCAGTATTTTATCGGTGTACAACTAGATGGAAGTGGTCGCGTGGAACCTTTGCAAAACCGTCTTTCTGAGACAGCAGAGCAGCAGAGTGCCATGCTGGTTAGAGCCACTGCAGAGAATGTTGATGAGGCTGTCCGTGAACTTCCTGATGCCAACTTGAGACCAGAAGATTTGTGGGCAATTTATTCTCAACCAGTCTTCCCAAGGCCTCACAAAAAGCATAGTTCTTCTTGGACTGCTATACAAAAGATTATTCAACGTCGTGAAAAAATTGGACTCCAACATTTTAAGCCAATCAAACCACTGGGTTATGGAGACACTGGCAGTGTTCATCTGGTGGAACTTCTAGGTACAAGCGAACTTTATGCCTTGAAAGCAATGGAGAAATCAACACTTCTGAATCGAAACAAGGTCCACAGAGCATGCATTGAAAGGCAAATCGTTGCACTTCTGGATCATCCTTTTCTTCCAACACTATACACTTCATTTGAGACCCCTACACACGTTTGTTTGATATCAGACTTTTGCCCTGGTGGGGAGTTATTTGCATTGCTTGATAAGCAGCCAATGAAATTGTTTAAAGAGGATTCTGCTAGGTTCTATGCTGCAGAGGTCGTCATTGGCTTGGAGTATCTTCACTGTCTAGGAATCATCTATCGAGATCTGAAGCCTGAAAATATTCTTCTCCAGAAGGATGGGCACGTTACGCTTGCTGACTTCGATTTATCGCTTATGACAGCCTGCAAACCACAGGTTGTGTGCTTCCCAATTTCTTGGTAG 1641 42.41 MFFVGKYKLHLISKNGIFFGRMQVEVSKYTEGKVDRALRPNGLPKSLIRYDARQKEKALGSITEVVQTVKNPRSNNRAMSHDITRKKEELEKFNFDSVLPKSVAAANYSPGRQTPQQDLTDDGLGKKSRLSSRVSLTGQKGKSLSSSRNLEVTALEPEILMTDEIERTDSLDRAERERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQDTVSKIRDAIREQREITVQLINYTKTGKKFWNLFHLQPMRDETGELQYFIGVQLDGSGRVEPLQNRLSETAEQQSAMLVRATAENVDEAVRELPDANLRPEDLWAIYSQPVFPRPHKKHSSSWTAIQKIIQRREKIGLQHFKPIKPLGYGDTGSVHLVELLGTSELYALKAMEKSTLLNRNKVHRACIERQIVALLDHPFLPTLYTSFETPTHVCLISDFCPGGELFALLDKQPMKLFKEDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVTLADFDLSLMTACKPQVVCFPISW 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1138326 1147761 - Carg19780-RA Car02g00191 142677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00191 546 ProSiteProfiles PAS repeat profile. 182 255 IPR000014 -
Car02g00191 546 ProSitePatterns Protein kinases ATP-binding region signature. 389 412 IPR017441 GO:0005524
Car02g00191 546 MobiDBLite consensus disorder prediction 107 148 - -
Car02g00191 546 Pfam Protein kinase domain 385 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00191 546 MobiDBLite consensus disorder prediction 130 148 - -
Car02g00191 546 ProSiteProfiles Protein kinase domain profile. 383 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00191 546 MobiDBLite consensus disorder prediction 107 121 - -
Car02g00191 546 ProSiteProfiles PAC domain profile. 256 310 IPR000700 -
Car02g00191 546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 504 516 IPR008271 GO:0004672|GO:0006468
Car02g00191 546 Pfam PAS domain 205 297 IPR000014 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00191 Car19g00644 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00191 Car-Chr2:1138326 Car02g00618 Car-Chr2:4649249 1.76E-29 dispersed
Car04g01670 Car-Chr4:9606281 Car02g00191 Car-Chr2:1138326 1.42E-26 dispersed
Car19g00644 Car-Chr19:7764953 Car02g00191 Car-Chr2:1138326 3.84E-32 wgd
Car02g00191 Car-Chr2:1138326 Car20g00592 Car-Chr20:3316494 7.28E-31 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88630 PF00069 Pkinase 9.60E-35 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00191 K20715 - csv:101215355 937.176