Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00199 ATGGGGGAATTTGAAGATGAGAGCCTTGTTAGTCCTTCCTCATTAACTAGAAAGAACTTTTCTATTGAGGGTCCTTCGCATTCTTCTTCATTGCCTGGTAGTACGCAGAAATTTTGTTATAGTAACATGAAGAACAGGGTGTTTCGCAGCATTAAGATCGTCGTTTTCTCGGCTAAAATCAACTGTCTCATGCCTTTTGGGCCTTTAGCAATAGTAGTCAGCAATTTATCTGGTCACCATGGTTGGGTCTTCCTTTTAAGCTTGTTGGGGATCATACCTCTCGCCGAGCGTTTGGGTTATGCAACCGAACAACTGGCATGCTATACTGGAGCCACAGTTGGAGGTCTTCTGAATGCTACTTTTGGAAATGCCACAGAATTGATAATATCAATATACGCATTGCGAAGAGGAATGATACGGGTTGTTCAACAGTCATTGTTAGGTTCAATTTTGTCAAATATGTTGTTAGTACTTGGATGTGCCTTCTTTGCTGGTGGAGTTGTGGTTTCGAAGAGGGAGCAGGTCTTCAATAAGGCAGCTGCTACAGTGAATTCTGGATTGCTATTAATGGCAGTAATGGGACTTCTATTTCCTGCTGTCCTTCGTTCCACACATACAGAGTTGCACTCTGGAAAGTCCGAGCTAGCTCTTTCGAGATTTAGTAGCGGCATTATGTTGGTGGCGTATGCTGCCTATCTTGTTTTCCAGCTGAAAAGCGACAAGAACTTATATCTACCGGTTGATGAGGCGGTTACTGATGAAAATTATGATGATGATGATGAAGAAGCTCCTGAGATTTCTATGTGGGAATCCATTACTTGGCTGTCTATCTTGACCATTTGGATCTCTGTCCTCTCTGAATACTTGGTTAATGCAATAGAGGGAGCGTCGGTTGCCATGAACATACCGGTAGCGTTCATTAGTGTTATCCTACTACCCATTGTTGGGAACGCTGCAGAGCATGCAGGAGCCATCATGTTTGCCATGAAAGACAAGCTTGACATTTCTTTGGGAGTTGCGATAGGATCGTCTACACAGATATCGATGTTCGGGATTCCTTTTTGTGTGGTCATTGGTTGGATCATGGGTTGCCCAATGGACTTGAATTTTCAACTCTTCGAGACTGCCACGCTTTTCATCACGGTCATTGTTGTAGCCTTCATGTTGCAGGACGGAACATCTAATTACCTCAAAGGACTGATGCTTATTCTCTGCTACCTGATAGTAGCTGCGAGTTTCTTTGTACATATTGATCCAGCTTCAGTTGAAGATAAACCCCAAAAACATCGTGGATGA 1296 43.21 MGEFEDESLVSPSSLTRKNFSIEGPSHSSSLPGSTQKFCYSNMKNRVFRSIKIVVFSAKINCLMPFGPLAIVVSNLSGHHGWVFLLSLLGIIPLAERLGYATEQLACYTGATVGGLLNATFGNATELIISIYALRRGMIRVVQQSLLGSILSNMLLVLGCAFFAGGVVVSKREQVFNKAAATVNSGLLLMAVMGLLFPAVLRSTHTELHSGKSELALSRFSSGIMLVAYAAYLVFQLKSDKNLYLPVDEAVTDENYDDDDEEAPEISMWESITWLSILTIWISVLSEYLVNAIEGASVAMNIPVAFISVILLPIVGNAAEHAGAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGCPMDLNFQLFETATLFITVIVVAFMLQDGTSNYLKGLMLILCYLIVAASFFVHIDPASVEDKPQKHRG 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1195676 1202284 - Carg19789-RA Car02g00199 142685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00199 431 Pfam Sodium/calcium exchanger protein 82 237 IPR004837 GO:0016021|GO:0055085
Car02g00199 431 Pfam Sodium/calcium exchanger protein 275 411 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00019 Car-Chr1:106379 Car02g00199 Car-Chr2:1195676 0 dispersed
Car02g00199 Car-Chr2:1195676 Car14g01084 Car-Chr14:9526489 3.60E-173 dispersed
Car02g00199 Car-Chr2:1195676 Car20g00598 Car-Chr20:3361033 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00199 K07300 - csv:101215915 756.133