Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00241 ATGGCTACTTACTATTCTAGTTCGAGTAATGGAAGGGAGGCTACTCCTATCCTCTACTCGAGAGGAGCTTTGATCGGTTCGTATGAAGACTCGTCGATTCTTCCCCGGAATATGATGATGCATAATTCTGGGATGTACATGGATTCATGTCCTTCGCAGGGAGACAATGGTTGTGGTCAGATAACGTCGGTTGGAGCAGCGGGAACGAGCCAACAACAGCAGGAGTTTTTGTCGAACCTCGGTGGTTCGGAGATTGCTGAGCATGATTTCAATACATGGAGAGGAGAGGGAAGGAGTGAAATGGTTGGTGCGAGCTCGATGCGTGGCCCGACCAATGTTCTTCATGGTGGGCAGAATTTGCAGGGTCAGGGGTTATCCCTTACTCTTAGTACACAAATTCCATCTGGAATTCAAATGCCTTCAATTCCTTATAAGAATTCGGATATGGGTTTAGCTTCGTTCTTGAGTCCGAATCTGACCAGTTCAGGCGACGATGGCTGCAGAAATGGCAGTTCTAGAGACGAGCAGTTGGCAAAGGGGGAATTATCTCAATACAGTATGTCTACGATTGCGAGAACGATGCCGAACTCGAAGTACCTTAAGGCAGCACAACAACTCCTTGATGAAGCTGTTAATGTCAGGAAAGCTTTGAAGCGACCTAATAATGAGAGAAACCAGAGCTCACATGAGCATGAAACTAGAAGTGGAAAGAATGGTGATGCAGGAACCAACGACGGTTCGATGCTCACTGCAAGCGGAGCGTCTTCGAACCCTCAAGAAACTGGAAGCAATTCAACTTGTGAGCTCTCTCATGCTGAAAAGCAAGATTTGCAGAACAAGTTGACAAAGCTTTTATACATGTTGGATGAGGTTGATAGAAGGTACAATCAGTATTACCATCAAATGCAGATTGTGGTATCATCATTTGATGTTATAGCAGGATGTGGGGCGTCTAAGCCATATACTGCACTTGCACTCCAGACTATATCTCGTCATTTTCGGTGCTTGCGGGATGCAATAGCTGGTCAAGTTCGAGCTACCCGTAAAAGCCTGGGAGAGCATGAGAATTCTGGAAATGACAAAGGAGTTGGAATCACCCGTCTCCGGTACGTCGACCAGCAGTTAAGGCAACAAAGGGCTCTTCAGCAGCTTGGTATGATACAGCAGCATGCATGGAGGCCTCAAAGAGGGTTGCCTGAGAACTCTGTTTCGATTCTTCGTGCTTGGCTGTTCGAGCATTTCCTTCATCCGTATCCAAAGGACTCTGATAAGATCATGTTGGCAAGGCAAACAGGATTGACTAGAAGTCAGGTCTCTAATTGGTTTATCAATGCACGTGTGCGTCTATGGAAACCTATGGTAGAGGAAATGTACAAGGAAGAGGCAGGCAGTGCAGAAATGGACTCTATATCATCATCTGAAAATATTGGCAAGGGAACAAAAGGAGATAACAGGACCTTTGAGGATAATGAGGAGGATCTGCAACAAAGTACAAGTTCAACAGCCACCGAAAGATGTAGCGCTGGAGACATTATCGACTTAAAATCCGATCAAGCCTCTAATCTTGGAAATTCAGGTTCCACCAGACTAGCTAGTTTCCAAAATGGTGCTCACATCGAAGCTCAAAACGAGCTGGTAAAGTCGAGGGAGGAGCTAAGGCCTAATGTAAATAACTCTAATTTCTTTCCTGATGCAATTGTCCAGTCTCAGGCAGGAAGTGACAGGTTTATGGCTGCCGCTGCTGCCTATCACATGTCTGAACTGGGAAGGTTCGGGGCGGTTAGCGGGGTATCGCTTACACTGGGCTTACAGCATTGTGAGGGTGGTGGCATACCTATGCCCACTGGGACACATCATGGTTTTGCAGCCATGAGAGGAGACGAAATGTACAATGCTGCAGCGTCTTCTCTCGGGGACACAGGCCATTTTGAATGCGTAAACGCTGGTAATCCGCAACCGAGGTTCGGCCCTTCTCATCTTTACCATGATTTTGTTGTGTAA 2001 46.58 MATYYSSSSNGREATPILYSRGALIGSYEDSSILPRNMMMHNSGMYMDSCPSQGDNGCGQITSVGAAGTSQQQQEFLSNLGGSEIAEHDFNTWRGEGRSEMVGASSMRGPTNVLHGGQNLQGQGLSLTLSTQIPSGIQMPSIPYKNSDMGLASFLSPNLTSSGDDGCRNGSSRDEQLAKGELSQYSMSTIARTMPNSKYLKAAQQLLDEAVNVRKALKRPNNERNQSSHEHETRSGKNGDAGTNDGSMLTASGASSNPQETGSNSTCELSHAEKQDLQNKLTKLLYMLDEVDRRYNQYYHQMQIVVSSFDVIAGCGASKPYTALALQTISRHFRCLRDAIAGQVRATRKSLGEHENSGNDKGVGITRLRYVDQQLRQQRALQQLGMIQQHAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEAGSAEMDSISSSENIGKGTKGDNRTFEDNEEDLQQSTSSTATERCSAGDIIDLKSDQASNLGNSGSTRLASFQNGAHIEAQNELVKSREELRPNVNNSNFFPDAIVQSQAGSDRFMAAAAAYHMSELGRFGAVSGVSLTLGLQHCEGGGIPMPTGTHHGFAAMRGDEMYNAAASSLGDTGHFECVNAGNPQPRFGPSHLYHDFVV 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1634715 1638183 + Carg24145-RA Car02g00241 142727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00241 666 MobiDBLite consensus disorder prediction 462 505 - -
Car02g00241 666 Coils Coil 274 294 - -
Car02g00241 666 MobiDBLite consensus disorder prediction 239 271 - -
Car02g00241 666 MobiDBLite consensus disorder prediction 218 238 - -
Car02g00241 666 Pfam Associated with HOX 195 341 IPR006563 -
Car02g00241 666 ProSiteProfiles 'Homeobox' domain profile. 389 452 IPR001356 GO:0003677
Car02g00241 666 MobiDBLite consensus disorder prediction 466 480 - -
Car02g00241 666 Pfam Homeobox KN domain 409 448 IPR008422 GO:0003677|GO:0006355
Car02g00241 666 MobiDBLite consensus disorder prediction 218 271 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00241 Car20g00709 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00241 Car-Chr2:1634715 Car14g00330 Car-Chr14:1571650 1.18E-109 dispersed
Car02g00241 Car-Chr2:1634715 Car20g00709 Car-Chr20:4092444 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2942 PF07526 POX 2.30E-50 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00241 - - csv:101205137 1167.53