Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car02g00265 | ATGTCTGATTCATCGGATTCTCCGTCTCCTTCTTCCGAATCGGATTCGGATTCTGGTTCCTCTCCCCCGCCTCCGTCTGATTCATCTCCACCTGCGCCCGAGTCCTCTCCGCCACCGCCGCAGGATGTTTCTCCGCCTCCTCCGACTGGTTCATCTCCACCTCCTCCGAATGCATCGCCGCCACCGCCGAATGACTCAACGTCTTCATCTCCTCCATCTCCTCCATCTCCTCCTCCGCCTCCTCCACCGCCACCACCTCCTCCGCCTTCTCCTCCACCTCCTGGATCCTCCAGGCATACTTCTCCGCCGAAATCGATCTCCTCCTCGCCTCATTCCCGATCCTCGGACTCCTCATCCGGCGACTCTACGCCTGAGGTGGTTCCGATTATTGTAGGAGTGGCGGTGGCGGCAGGATTTTTGCTATTCGCCATGGCACTGATATTCTTCGCTTGCAGCCGAAAGAAAAAGAAGCGTGAGAGTAATACCGTATACTACGATGATCGGCCTAATCAGAAAGGTGGGGACCCCTATTACAACGGAAGGAATCAGAACTGGAACGGTACGGGCGAACATTTCGTGAACATACCGCCAGCCACCGGCGGAGGGCAAGGAGGAGGATGGCCACCGCCAGCCACCGGCGGTGGGCAGGGAGGAGCATGGCCACCGCCAGCCCCCGGCGGAGGGCAAGGAGGAGCATGGCCACCGCCAGCCCCCGGCGGAGGGCAAGGAGGAGTATGGCCACCGCCGCCGCCACCACCGGGATTATTAAGCAGCGACATGAGCTCAAGCTTCTCAGGGCCACATGGGCCACCGTTACCACCGCCACACCCGTCGGTGGCGCTGGGGTTCAATAAAAACACGTTCACATTCGACGAGCTGATGGCAGCGACAGGCGGATTCTCTCCGGCGAACTTGTTGGGGCAAGGCGGATTCGGATACGTTCATAAAGGAGTGCTACCCAACGGCAAGGAAATTGCCGTAAAAAGCCTTAAAACAGGTAGCGGACAAGGAGATCGGGAATTCGCGGCGGAAGTAGAGATTATCAGCCGCGTCCACCACCGTCATTTGGTATCCCTCGTCGGTTATTGCATGACCAATGATCGGAAAATGTTGGTGTACGAATTTGTTCCTAATAACAACCTCGATTTCCACCTTCATGGGGAGGGGCGCCCGCCGATGCCATGGTCGATGAGAGTCAAGATCGCACTCGGTGCAGCTAAGGGTCTATCCTACCTCCACGAAGACTGTCATCCTCGCATCATCCATAGAGACATTAAGACGGCAAATATTCTTATAGACATGAGTTTTGAAGCAAAGGTGGCTGATTTTGGATTGGCTAAGCTCAACCAGGACAATTACACTCATGTATCCACTCGCGTTATGGGCACATTTGGTTATTTGGCTCCGGAATATGCATCAAGTGGGAAGCTAACAGAGAAATCAGACGTATTTTCATACGGAGTAATGCTTTTGGAGATCATAACTGGAAGACGACCCGTGGACGCATCGGGGGAGCTGATGGAGGACAGCTTAGTGGATTGGGCGAGGCCTCTATGCTTGAAAGCAATGACTGAAGGAGCCTACGAGGCGTTGGCAGATCCAAGATTGGAGAAGGACTACGACGCTCAGGAAATGGCATGCATGGTGGCTTGTGCTGCCGCATGCATTCGCCATTCTGCTAAACGTCGTCCCAAAATGAGCCAAGTTGTGCGGGCACTCGAAGGCGACGTATCGATGGAGGATTTGAACGACGGAGTAAAGCCAGGTCAAAGCTCATACTTCGGCTCCGGTACGTCGTCGGATTACGACGCAAGCTCTTACAGCGCCGACATGAAAAGGTTCAGAAAGGTAGCATTGGAAAGCCGGGAATACACTAGCAGTGATTATGGTGGGACGAGCGAGTATGGGCTAAACCCATCAGCGACGAGCAGTGACAATAGTCAGAAGCCAAGCCAAGCGTCATCGCCCAATTTACAGCCCAACAAACCCTAA | 1992 | 54.72 | MSDSSDSPSPSSESDSDSGSSPPPPSDSSPPAPESSPPPPQDVSPPPPTGSSPPPPNASPPPPNDSTSSSPPSPPSPPPPPPPPPPPPPSPPPPGSSRHTSPPKSISSSPHSRSSDSSSGDSTPEVVPIIVGVAVAAGFLLFAMALIFFACSRKKKKRESNTVYYDDRPNQKGGDPYYNGRNQNWNGTGEHFVNIPPATGGGQGGGWPPPATGGGQGGAWPPPAPGGGQGGAWPPPAPGGGQGGVWPPPPPPPGLLSSDMSSSFSGPHGPPLPPPHPSVALGFNKNTFTFDELMAATGGFSPANLLGQGGFGYVHKGVLPNGKEIAVKSLKTGSGQGDREFAAEVEIISRVHHRHLVSLVGYCMTNDRKMLVYEFVPNNNLDFHLHGEGRPPMPWSMRVKIALGAAKGLSYLHEDCHPRIIHRDIKTANILIDMSFEAKVADFGLAKLNQDNYTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSYGVMLLEIITGRRPVDASGELMEDSLVDWARPLCLKAMTEGAYEALADPRLEKDYDAQEMACMVACAAACIRHSAKRRPKMSQVVRALEGDVSMEDLNDGVKPGQSSYFGSGTSSDYDASSYSADMKRFRKVALESREYTSSDYGGTSEYGLNPSATSSDNSQKPSQASSPNLQPNKP | 663 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1803418 | 1806232 | - | Carg22950-RA | Car02g00265 | 142751 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car02g00265 | 663 | MobiDBLite | consensus disorder prediction | 176 | 190 | - | - | |
Car02g00265 | 663 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Car02g00265 | 663 | MobiDBLite | consensus disorder prediction | 623 | 663 | - | - | |
Car02g00265 | 663 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 420 | 432 | IPR008271 | GO:0004672|GO:0006468 | |
Car02g00265 | 663 | ProSiteProfiles | Protein kinase domain profile. | 300 | 579 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car02g00265 | 663 | MobiDBLite | consensus disorder prediction | 1 | 123 | - | - | |
Car02g00265 | 663 | ProSitePatterns | Protein kinases ATP-binding region signature. | 306 | 328 | IPR017441 | GO:0005524 | |
Car02g00265 | 663 | MobiDBLite | consensus disorder prediction | 157 | 278 | - | - | |
Car02g00265 | 663 | MobiDBLite | consensus disorder prediction | 589 | 605 | - | - | |
Car02g00265 | 663 | MobiDBLite | consensus disorder prediction | 625 | 663 | - | - | |
Car02g00265 | 663 | Pfam | Protein tyrosine and serine/threonine kinase | 305 | 573 | IPR001245 | GO:0004672|GO:0006468 | |
Car02g00265 | 663 | MobiDBLite | consensus disorder prediction | 580 | 605 | - | - | |
Car02g00265 | 663 | MobiDBLite | consensus disorder prediction | 240 | 256 | - | - | |
Car02g00265 | 663 | MobiDBLite | consensus disorder prediction | 100 | 123 | - | - | |
Car02g00265 | 663 | MobiDBLite | consensus disorder prediction | 23 | 99 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car02g00265 | Car-Chr2:1803418 | Car10g00573 | Car-Chr10:2897136 | 0 | dispersed | |
Car02g00265 | Car-Chr2:1803418 | Car20g00740 | Car-Chr20:4341924 | 2.57E-12 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
88632 | PF07714 | PK_Tyr_Ser-Thr | 3.50E-47 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car02g00265 | - | - | csv:101217306 | 670.618 |