Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00265 ATGTCTGATTCATCGGATTCTCCGTCTCCTTCTTCCGAATCGGATTCGGATTCTGGTTCCTCTCCCCCGCCTCCGTCTGATTCATCTCCACCTGCGCCCGAGTCCTCTCCGCCACCGCCGCAGGATGTTTCTCCGCCTCCTCCGACTGGTTCATCTCCACCTCCTCCGAATGCATCGCCGCCACCGCCGAATGACTCAACGTCTTCATCTCCTCCATCTCCTCCATCTCCTCCTCCGCCTCCTCCACCGCCACCACCTCCTCCGCCTTCTCCTCCACCTCCTGGATCCTCCAGGCATACTTCTCCGCCGAAATCGATCTCCTCCTCGCCTCATTCCCGATCCTCGGACTCCTCATCCGGCGACTCTACGCCTGAGGTGGTTCCGATTATTGTAGGAGTGGCGGTGGCGGCAGGATTTTTGCTATTCGCCATGGCACTGATATTCTTCGCTTGCAGCCGAAAGAAAAAGAAGCGTGAGAGTAATACCGTATACTACGATGATCGGCCTAATCAGAAAGGTGGGGACCCCTATTACAACGGAAGGAATCAGAACTGGAACGGTACGGGCGAACATTTCGTGAACATACCGCCAGCCACCGGCGGAGGGCAAGGAGGAGGATGGCCACCGCCAGCCACCGGCGGTGGGCAGGGAGGAGCATGGCCACCGCCAGCCCCCGGCGGAGGGCAAGGAGGAGCATGGCCACCGCCAGCCCCCGGCGGAGGGCAAGGAGGAGTATGGCCACCGCCGCCGCCACCACCGGGATTATTAAGCAGCGACATGAGCTCAAGCTTCTCAGGGCCACATGGGCCACCGTTACCACCGCCACACCCGTCGGTGGCGCTGGGGTTCAATAAAAACACGTTCACATTCGACGAGCTGATGGCAGCGACAGGCGGATTCTCTCCGGCGAACTTGTTGGGGCAAGGCGGATTCGGATACGTTCATAAAGGAGTGCTACCCAACGGCAAGGAAATTGCCGTAAAAAGCCTTAAAACAGGTAGCGGACAAGGAGATCGGGAATTCGCGGCGGAAGTAGAGATTATCAGCCGCGTCCACCACCGTCATTTGGTATCCCTCGTCGGTTATTGCATGACCAATGATCGGAAAATGTTGGTGTACGAATTTGTTCCTAATAACAACCTCGATTTCCACCTTCATGGGGAGGGGCGCCCGCCGATGCCATGGTCGATGAGAGTCAAGATCGCACTCGGTGCAGCTAAGGGTCTATCCTACCTCCACGAAGACTGTCATCCTCGCATCATCCATAGAGACATTAAGACGGCAAATATTCTTATAGACATGAGTTTTGAAGCAAAGGTGGCTGATTTTGGATTGGCTAAGCTCAACCAGGACAATTACACTCATGTATCCACTCGCGTTATGGGCACATTTGGTTATTTGGCTCCGGAATATGCATCAAGTGGGAAGCTAACAGAGAAATCAGACGTATTTTCATACGGAGTAATGCTTTTGGAGATCATAACTGGAAGACGACCCGTGGACGCATCGGGGGAGCTGATGGAGGACAGCTTAGTGGATTGGGCGAGGCCTCTATGCTTGAAAGCAATGACTGAAGGAGCCTACGAGGCGTTGGCAGATCCAAGATTGGAGAAGGACTACGACGCTCAGGAAATGGCATGCATGGTGGCTTGTGCTGCCGCATGCATTCGCCATTCTGCTAAACGTCGTCCCAAAATGAGCCAAGTTGTGCGGGCACTCGAAGGCGACGTATCGATGGAGGATTTGAACGACGGAGTAAAGCCAGGTCAAAGCTCATACTTCGGCTCCGGTACGTCGTCGGATTACGACGCAAGCTCTTACAGCGCCGACATGAAAAGGTTCAGAAAGGTAGCATTGGAAAGCCGGGAATACACTAGCAGTGATTATGGTGGGACGAGCGAGTATGGGCTAAACCCATCAGCGACGAGCAGTGACAATAGTCAGAAGCCAAGCCAAGCGTCATCGCCCAATTTACAGCCCAACAAACCCTAA 1992 54.72 MSDSSDSPSPSSESDSDSGSSPPPPSDSSPPAPESSPPPPQDVSPPPPTGSSPPPPNASPPPPNDSTSSSPPSPPSPPPPPPPPPPPPPSPPPPGSSRHTSPPKSISSSPHSRSSDSSSGDSTPEVVPIIVGVAVAAGFLLFAMALIFFACSRKKKKRESNTVYYDDRPNQKGGDPYYNGRNQNWNGTGEHFVNIPPATGGGQGGGWPPPATGGGQGGAWPPPAPGGGQGGAWPPPAPGGGQGGVWPPPPPPPGLLSSDMSSSFSGPHGPPLPPPHPSVALGFNKNTFTFDELMAATGGFSPANLLGQGGFGYVHKGVLPNGKEIAVKSLKTGSGQGDREFAAEVEIISRVHHRHLVSLVGYCMTNDRKMLVYEFVPNNNLDFHLHGEGRPPMPWSMRVKIALGAAKGLSYLHEDCHPRIIHRDIKTANILIDMSFEAKVADFGLAKLNQDNYTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSYGVMLLEIITGRRPVDASGELMEDSLVDWARPLCLKAMTEGAYEALADPRLEKDYDAQEMACMVACAAACIRHSAKRRPKMSQVVRALEGDVSMEDLNDGVKPGQSSYFGSGTSSDYDASSYSADMKRFRKVALESREYTSSDYGGTSEYGLNPSATSSDNSQKPSQASSPNLQPNKP 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1803418 1806232 - Carg22950-RA Car02g00265 142751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00265 663 MobiDBLite consensus disorder prediction 176 190 - -
Car02g00265 663 MobiDBLite consensus disorder prediction 1 22 - -
Car02g00265 663 MobiDBLite consensus disorder prediction 623 663 - -
Car02g00265 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Car02g00265 663 ProSiteProfiles Protein kinase domain profile. 300 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00265 663 MobiDBLite consensus disorder prediction 1 123 - -
Car02g00265 663 ProSitePatterns Protein kinases ATP-binding region signature. 306 328 IPR017441 GO:0005524
Car02g00265 663 MobiDBLite consensus disorder prediction 157 278 - -
Car02g00265 663 MobiDBLite consensus disorder prediction 589 605 - -
Car02g00265 663 MobiDBLite consensus disorder prediction 625 663 - -
Car02g00265 663 Pfam Protein tyrosine and serine/threonine kinase 305 573 IPR001245 GO:0004672|GO:0006468
Car02g00265 663 MobiDBLite consensus disorder prediction 580 605 - -
Car02g00265 663 MobiDBLite consensus disorder prediction 240 256 - -
Car02g00265 663 MobiDBLite consensus disorder prediction 100 123 - -
Car02g00265 663 MobiDBLite consensus disorder prediction 23 99 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00265 Car-Chr2:1803418 Car10g00573 Car-Chr10:2897136 0 dispersed
Car02g00265 Car-Chr2:1803418 Car20g00740 Car-Chr20:4341924 2.57E-12 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88632 PF07714 PK_Tyr_Ser-Thr 3.50E-47 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00265 - - csv:101217306 670.618