Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00278 ATGGAGGACTGCATCAGCAGCGATGAAGACTACTATGACTCCGATCGAGAATCTCTCCACGGCCTCGAGAACGAGGACTCTGAAATTCAGTGGATTCCTAAAACTTCTGCGACTAAGGTTATTACGAAGGAATGTCTCCTTGCGGCACAGAAGGAAGATATGCGTAGAGTAATGGATATGTTATCATTGAGGGAATATCATGCTCGGACCTTACTCATTCATTACCGATGGGATGTAGAGAAATTGTTTGCAGTACTTGTGGAGAAAGGGAGACATCATTTGTTTGCTACATCTGGTGTTACTATGATTGAGAATCAAAGTATTAGCTCCTCTGAGCCTTCTTCCATGGTGATGTGTGATATCTGCATGGAGGAAGTTCATGGCAATGATGCAACTAGAGTTGACTGTGGCCATTGCTTTTGTAATAACTGTTGGACTGAACATTTCATTGTGAAAATAAACGAGGGTCAAAGTCGGAGAATTAGATGCATGGCTCATAAATGTAATGCTATTTGTGATGAAGCTGTTGTTAGGAATCTAGTTAGTAAAAGACATCCGGATCTTGCCAATAAATTTGATCGTTTTCTTCTTGAATCGTACATTGAGGATAACAAGAGAGTCAAATGGTGTCCGAGTACCCCTCACTGTGGTAACGCTATACGCGTGGAGGATGATGAGTTTTGTGAAGTAGAATGTTCGTGCGGTCTTCAATTTTGTTTCAGTTGCTTATCAGAGGCTCACTCACCATGTTCATGTTTGATGTGGGAACTTTGGATTAAGAAGTGTCGAGATGAATCCGAAACAGTTAACTGGATGACAGTACATACAAAACCCTGTCCAAAGTGCCACAAACCTGTCGAGAAGAATGGTGGCTGTAACCTCGTCAGCTGCATCTGTGGACAAGCATTTTGTTGGTTGTGTGGTGGAGCTACTGGTCGAGAACACACTTGGTCGAGTATTTCTGGTCACAGTTGTGGACGTTACAAAGAAGAATCAGCACAAAAAGCTGAGAGAGCAAAACGGGATTTGTATCGCTATATGCACTATCATAATCGATACAAAGCTCATACAGATTCTTGTAAGCTGGAAAGCAAATTGAAGGAATCCATACAAGAGAAGATTTCGATATCTGAAGAGAGGGAATCCATGCTGAGAGATTTTAGTTGGGTAAACAATGGACTTCATAGGCTTTTCAGATCAAGGCGGGTTTTATCATATTCTTACCCATTTGCATTCTATATGTTCGGGGACGAGCTATTCAAAGACGAGATGACCGAGGAGGAAAGGGAAATAAAGCAACATCTATTTGAGGACCAACAACAACAACTTGAGGCAAATGTTGAGAAGCTCTCCAAGTTCTTAGAGGAACCGTTTGATCAATACGCCAAAGATAAGGTAATGGAGATAAGGATGCAAGTCATCAATCTGTCTGTTATCACCGATACCCTTTGCAAGAAGATGTATGACTGCATTGAAAATGATCTTCTGGGTTCTCTTGAACTGGGTATACACAATATTGCTCCGTACAAGTCGAAAGGAATCGAGAAAGCACTGGAACTTTCGGCTTGTTGGAACAGCAAAACGAATACTACTATTGATAAATATCTTCCATCAGACTGTAGTACAAGTGGAGGATTGTCGGAACGCGATCGTTTGTCTGGATTGAACTCCGACGAGAACGGATGCTCTTCTAGGAAGCGTGCCAGAGCAGACGTTGTTACTGGTAACTTTTTTGATCTAAACTTGCCTGCTGAGGTGGTTGACAGAAACTAA 1773 41.91 MEDCISSDEDYYDSDRESLHGLENEDSEIQWIPKTSATKVITKECLLAAQKEDMRRVMDMLSLREYHARTLLIHYRWDVEKLFAVLVEKGRHHLFATSGVTMIENQSISSSEPSSMVMCDICMEEVHGNDATRVDCGHCFCNNCWTEHFIVKINEGQSRRIRCMAHKCNAICDEAVVRNLVSKRHPDLANKFDRFLLESYIEDNKRVKWCPSTPHCGNAIRVEDDEFCEVECSCGLQFCFSCLSEAHSPCSCLMWELWIKKCRDESETVNWMTVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGREHTWSSISGHSCGRYKEESAQKAERAKRDLYRYMHYHNRYKAHTDSCKLESKLKESIQEKISISEERESMLRDFSWVNNGLHRLFRSRRVLSYSYPFAFYMFGDELFKDEMTEEEREIKQHLFEDQQQQLEANVEKLSKFLEEPFDQYAKDKVMEIRMQVINLSVITDTLCKKMYDCIENDLLGSLELGIHNIAPYKSKGIEKALELSACWNSKTNTTIDKYLPSDCSTSGGLSERDRLSGLNSDENGCSSRKRARADVVTGNFFDLNLPAEVVDRN 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1881519 1885459 - Carg22963-RA Car02g00278 142764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00278 590 ProSiteProfiles TRIAD supradomain profile. 115 329 IPR044066 -
Car02g00278 590 MobiDBLite consensus disorder prediction 540 561 - -
Car02g00278 590 ProSiteProfiles Zinc finger RING-type profile. 119 167 IPR001841 -
Car02g00278 590 Pfam IBR domain, a half RING-finger domain 191 252 IPR002867 -
Car02g00278 590 Pfam Ariadne domain 329 590 IPR045840 -
Car02g00278 590 MobiDBLite consensus disorder prediction 540 563 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00278 Car-Chr2:1881519 Car17g00550 Car-Chr17:5131842 3.46E-60 dispersed
Car02g00278 Car-Chr2:1881519 Car20g00750 Car-Chr20:4397091 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00278 K11968 - csv:101205066 1143.64